Publications

2022

Montoya NR, Porsch EA, Muñoz VL, Muszyński A, Vlach J, Hahn DK, Azadi P, Sherman M, Yang H, Chandler CE, Ernst RK, St Geme JW 3rd. Surface Anchoring of the Kingella kingae Galactan Is Dependent on the Lipopolysaccharide O-Antigen. mBio. 2022 Oct 26;13(5):e0229522. doi: 10.1128/mbio.02295-22. Epub 2022 Sep 7. PubMed PMID: 36069736; PubMed Central PMCID: PMC9615999.May;18(5):e1010488. doi: 10.1371/journal.ppat.1010488. eCollection 2022 May. PubMed PMID: 35503780; PubMed Central PMCID: PMC9106183

Sosicka P, Ng BG, Pepi LE, Shajahan A, Wong M, Scott DA, Matsumoto K, Xia ZJ, Lebrilla CB, Haltiwanger RS, Azadi P, Freeze HH. Origin of cytoplasmic GDP-fucose determines its contribution to glycosylation reactions. J Cell Biol. 2022 Oct 3;221(10). doi: 10.1083/jcb.202205038. Epub 2022 Sep 2. PubMed PMID: 36053214; PubMed Central PMCID: PMC9441714.

Spellmon N, Muszyński A, Górniak I, Vlach J, Hahn D, Azadi P, Zimmer J. Molecular basis for polysaccharide recognition and modulated ATP hydrolysis by the O antigen ABC transporter. Nat Commun. 2022 Sep 5;13(1):5226. doi: 10.1038/s41467-022-32597-2. PubMed PMID: 36064941; PubMed Central PMCID: PMC9445017.

Barnard DL, Belnap DM, Azadi P, Heiss C, Snyder DS, Bock SC, Konowalchuk TW. Examining the interactions of Galahad™ compound with viruses to develop a novel inactivated influenza A virus vaccine. Heliyon. 2022 Jul;8(7):e09887. doi: 10.1016/j.heliyon.2022.e09887. Epub 2022 Jul 6. PubMed PMID: 35821966; PubMed Central PMCID: PMC9258431.

Cao X, Wang S, Gadi MR, Liu D, Wang PG, Wan XF, Zhang J, Chen X, Pepi LE, Azadi P, Li L. Systematic synthesis of bisected N-glycans and unique recognitions by glycan-binding proteins. Chem Sci. 2022 Jun 29;13(25):7644-7656. doi: 10.1039/d1sc05435j. eCollection 2022 Jun 29. PubMed PMID: 35872821; PubMed Central PMCID: PMC9241959.

Yang Y, Xu B, Haverstick J, Ibtehaz N, Muszyński A, Chen X, Chowdhury MEH, Zughaier SM, Zhao Y. Differentiation and classification of bacterial endotoxins based on surface enhanced Raman scattering and advanced machine learning. Nanoscale. 2022 Jun 23;14(24):8806-8817. doi: 10.1039/d2nr01277d. PubMed PMID: 35686584; PubMed Central PMCID: PMC9575096.

Erickson JJ, Archer-Hartmann S, Yarawsky AE, Miller JLC, Seveau S, Shao TY, Severance AL, Miller-Handley H, Wu Y, Pham G, Wasik BR, Parrish CR, Hu YC, Lau JTY, Azadi P, Herr AB, Way SS. Pregnancy enables antibody protection against intracellular infection. Nature. 2022 Jun;606(7915):769-775. doi: 10.1038/s41586-022-04816-9. Epub 2022 Jun 8. PubMed PMID: 35676476; PubMed Central PMCID: PMC9233044.

Maceda-López LF, Góngora-Castillo EB, Ibarra-Laclette E, Morán-Velázquez DC, Girón Ramírez A, Bourdon M, Villalpando-Aguilar JL, Toomer G, Tang JZ, Azadi P, Santamaría JM, López-Rosas I, López MG, Simpson J, Alatorre-Cobos F. Transcriptome Mining Provides Insights into Cell Wall Metabolism and Fiber Lignification in Agave tequilana Weber. Plants (Basel). 2022 Jun 2;11(11). doi: 10.3390/plants11111496. PubMed PMID: 35684270; PubMed Central PMCID: PMC9182668.

2021

Barnes WJ, Koj S, Black IM, Archer-Hartmann SA, Azadi P, Urbanowicz BR, Pena MJ, O’Neill MA. (2021) Protocols for isolating and characterizing polysaccharides from plant cell walls: a case study using rhamnogalacturonan-II. Biotechnol Biofuels, 14, 142. June 22, 2021. https://doi.org/10.1186/s13068-021-01992-0

Shajahan A, Pepi LE, Rouhani DS, Heiss C, Azadi P. (2021) Glycosylation of SARS-CoV-2: structural and functional insights. Anal Bioanal Chem, June 22, 2021. https://doi.org/10.1007/s00216-021-03499-x

Supekar NT, Shajahan A, Gleinich AS, Rouhani DS, Heiss C, Chapla DG, Moremen KW, Azadi P. (2021) Variable posttranslational modifications of severe acute respiratory syndrome coronavirus 2 nucleocapsid protein, Glycobiology, May 13, 2021. cwab044, https://doi.org/10.1093/glycob/cwab044

Heiss C, Black I, Ishihara M, Tatli M, Devarenne TP, Azadi P. (2021) Structure of the polysaccharide sheath from the B race of the green microalga Botryococcus braunii. Algal Research. 55:102252. May 1, 2021. https://doi.org/10.1016/j.algal.2021.102252

Sun X, Wu Q, Picha DH, Ferguson MH, Ndukwe IE, Azadi P. (2021) Comparative performance of bio-based coatings formulated with cellulose, chitin, and chitosan nanomaterials suitable for fruit preservation. Carbohydrate Polymers. May 1, 2021. 259:117764. https://doi.org/10.1016/j.carbpol.2021.117764

Zeb M, Tackaberry LE, Massicotte HB, Egger KN, Reimer K, Lu G, Heiss C, Azadi P, Lee CH. (2021) Structural elucidation and immuno-stimulatory activity of a novel polysaccharide containing glucuronic acid from the fungus Echinodontium tinctorium. Carbohydrate Polymers. 258:117700. Apr 15, 2021. https://doi.org/10.1016/j.carbpol.2021.117700

Mathur B, Shajahan A, Arif W, Chen Q, Hand NJ, Abramowitz LK, Schoonjans K, Rader DJ, Kalsotra A, Hanover JA, Azadi P. (2021) Nuclear receptors FXR and SHP regulate protein N-glycan modifications in the liver. Science Advances. 7(17):eabf4865. Apr 1, 2021. https://doi.org/10.1126/sciadv.abf4865

Shajahan A, Archer-Hartmann S, Supekar NT, Gleinich AS, Heiss C, Azadi P. (2021) Comprehensive characterization of N-and O-glycosylation of SARS-CoV-2 human receptor angiotensin converting enzyme 2. Glycobiology. 31(4):410-24. Apr 2021. https://doi.org/10.1093/glycob/cwaa101

dos Santos Dias L, Dobson HE, Bakke BK, Kujoth GC, Huang J, Kohn EM, Taira CL, Wang H, Supekar NT, Fites JS, Gates D, Gomez CL, Specht CA, Levitz SM, Azadi P, Li L, Suresh M, Klein BS, Wuthrich M. (2021) Structural basis of Blastomyces Endoglucanase-2 adjuvancy in anti-fungal and-viral immunity. PLoS pathogens. 17(3):e1009324. Mar 18, 2021. https://doi.org/10.1371/journal.ppat.1009324

Wang M, Shajahan A, Pepi LE, Azadi P, Zaia J. (2021) Glycoproteomic Sample Processing, LC‐MS, and Data Analysis Using GlycReSoft. Current Protocols. 1(3):e84. Mar 2021. https://doi.org/10.1002/cpz1.84

Latchoumane CF, Betancur MI, Simchick GA, Sun MK, Forghani R, Lenear CE, Ahmed A, Mohankumar R, Balaji N, Mason HD, Archer-Hartmann SA, Azadi P, Holmes PV, Zhao Q, Bellamkonda RV, Karumbaiah L. (2021) Engineered glycomaterial implants orchestrate large-scale functional repair of brain tissue chronically after severe traumatic brain injury. Science advances. 7(10):eabe0207. Mar 1, 2021. https://doi.org/10.1126/sciadv.abe0207

Ma X, Li Y, Kondo Y, Shi H, Han J, Jiang Y, Bai X, Archer-Hartmann SA, Azadi P, Ruan C, Fu J. (2021) Slc35a1 deficiency causes thrombocytopenia due to impaired megakaryocytopoiesis and excessive platelet clearance in the liver. haematologica. 106(3):759. Mar 1, 2021. https://doi.org/10.3324/haematol.2019.225987

Soto MJ, Prabhakar PK, Wang HT, Backe J, Chapla D, Bartetzko M, Black IM, Azadi P, Peña MJ, Pfrengle F, Moremen KW. (2021) AtFUT4 and AtFUT6 Are Arabinofuranose-Specific Fucosyltransferases. Frontiers in plant science. 12:132. Feb 9, 2021. https://doi.org/10.3389/fpls.2021.589518

Talabnin K, Talabnin C, Khiaowichit J, Sutatum N, Asavaritikrai P, Suksaweang S, Tongtawee T, Ishihara M, Azadi P, Sripa B. (2021) High expression of tissue O-linked glycans is associated with a malignant phenotype of cholangiocarcinoma. Journal of International Medical Research. 49(2):0300060520976864. Feb 2021. https://doi.org/10.1177/0300060520976864

Bogacz M, El Abbar FM, Cox CA, Li J, Fiedler JS, Tran LK, Tran PM, Daugherty CL, Blake KH, Wang Z, Azadi P. (2021) Binding of Campylobacter jejuni FliW Adjacent to the CsrA RNA-Binding Pockets Modulates CsrA Regulatory Activity. Frontiers in microbiology. 11:3383. Jan 11, 2021. https://doi.org/10.3389/fmicb.2020.531596

Damron CL, Casasnovas J, Jarrell J, Orr KS, Bone RN, Archer-Hartmann S, Azadi P, Kua KL. (2021) Offspring of Obese Dams Exhibit Sex-Differences in Pancreatic Heparan Sulfate Glycosaminoglycans and Islet Insulin Secretion. Frontiers in endocrinology. 12:507. 2021. https://doi.org/10.3389/fendo.2021.658439

Black I, Heiss C, Carlson RW, Azadi P. (2021) Linkage Analysis of Oligosaccharides and Polysaccharides: A Tutorial. Methods in Molecular Biology (Clifton, NJ). 2271:249-71. Jan 1, 2021. https://doi.org/10.1007/978-1-0716-1241-5_18

Yue J, Jin W, Yang H, Faulkner J, Song X, Qiu H, Teng M, Azadi P, Zhang F, Linhardt RJ, Wang L. (2021) Heparan Sulfate Facilitates Spike Protein-Mediated SARS-CoV-2 Host Cell Invasion and Contributes to Increased Infection of SARS-CoV-2 G614 Mutant and in Lung Cancer. Frontiers in Molecular Biosciences. 8. 2021. https://doi.org/10.3389/fmolb.2021.649575

Muszyński A, Zarember KA, Heiss C, Shiloach J, Berg LJ, Audley J, Kozyr A, Greenberg DE, Holland SM, Malech HL, Azadi P. (2021) Granulibacter bethesdensis, a Pathogen from Patients with Chronic Granulomatous Disease, Produces a Penta-Acylated Hypostimulatory Glycero-D-talo-oct-2-ulosonic Acid–Lipid A Glycolipid (Ko-Lipid A). International journal of molecular sciences. 22(7):3303. Jan 2021. https://doi.org/10.3390/ijms22073303

2020

Docampo-Palacios ML, Alvarez-Hernández A, Adiji O, Gamiotea-Turro D, Valerino-Diaz AB, Viegas LP, Ndukwe IE, de Fátima Â, Heiss C, Azadi P, Pasinetti GM. (2020) Glucuronidation of methylated quercetin derivatives: chemical and biochemical approaches. Journal of agricultural and food chemistry. 68(50):14790-807. Dec 8, 2020. https://doi.org/10.1021/acs.jafc.0c04500

Morán-Velázquez DC, Monribot-Villanueva JL, Bourdon M, Tang JZ, López-Rosas I, Maceda-López LF, Villalpando-Aguilar JL, Rodríguez-López L, Gauthier A, Trejo L, Azadi P. (2020) Unravelling Chemical Composition of Agave Spines: News from Agave fourcroydes Lem. Plants. 9(12):1642. Dec 2020. https://doi.org/10.3390/plants9121642

Shajahan A, Supekar NT, Gleinich AS, Azadi P. (2020) Deducing the N-and O-glycosylation profile of the spike protein of novel coronavirus SARS-CoV-2. Glycobiology. 30(12):981-8. Dec 2020. https://doi.org/10.1093/glycob/cwaa042

Nanno Y, Shajahan A, Sonon RN, Azadi P, Hering BJ, Burlak C. (2020) High-mannose type N-glycans with core fucosylation and complex-type N-glycans with terminal neuraminic acid residues are unique to porcine islets. Plos one. 15(11):e0241249. Nov 10, 2020. https://doi.org/10.1371/journal.pone.0241249

Natarajan A, Jaroentomeechai T, Cabrera-Sánchez M, Mohammed JC, Cox EC, Young O, Shajahan A, Vilkhovoy M, Vadhin S, Varner JD, Azadi P. (2020) Engineering orthogonal human O-linked glycoprotein biosynthesis in bacteria. Nature chemical biology. 16(10):1062-70. Oct 2020. https://doi.org/10.1038/s41589-020-0595-9

Porfirio S, Archer-Hartmann S, Moreau GB, Ramakrishnan G, Haque R, Kirkpatrick BD, Petri Jr WA, Azadi P. (2020) New strategies for profiling and characterization of human milk oligosaccharides. Glycobiology. 30(10):774-86. Oct 2020. https://doi.org/10.1093/glycob/cwaa028

Justen AM, Hodges HL, Kim LM, Sadecki PW, Porfirio S, Ultee E, Black I, Chung GS, Briegel A, Azadi P, Kiessling LL. (2020) Polysaccharide length affects mycobacterial cell shape and antibiotic susceptibility. Science advances. 6(38):eaba4015. Sep 1, 2020. https://doi.org/10.1126/sciadv.aba4015

Shajahan A, Supekar NT, Wu H, Wands AM, Bhat G, Kalimurthy A, Matsubara M, Ranzinger R, Kohler JJ, Azadi P. (2020) Mass spectrometric method for the unambiguous profiling of cellular dynamic glycosylation. ACS chemical biology. 15(10):2692-701. Aug 18, 2020. https://doi.org/10.1021/acschembio.0c00453

Kittur FS, Hung CY, Zhu C, Shajahan A, Azadi P, Thomas MD, Pearce JL, Gruber C, Kallolimath S, Xie J. (2020) Glycoengineering tobacco plants to stably express recombinant human erythropoietin with different N-glycan profiles. International journal of biological macromolecules. 157:158-69. Aug 15, 2020. https://doi.org/10.1016/j.ijbiomac.2020.04.199

Ndukwe IE, Black I, Heiss C, Azadi P. (2020) Evaluating the Utility of Permethylated Polysaccharide Solution NMR Data for Characterization of Insoluble Plant Cell Wall Polysaccharides. Analytical Chemistry. 92(19):13221-8. Aug 14, 2020. https://doi.org/10.1021/acs.analchem.0c02379

Heiss C, Azadi P. (2020) Carbohydrate Structure Analysis: Methods and Applications. SLAS TECHNOLOGY: Translating Life Sciences Innovation. 25(4):305-306. 2020. https://doi.org/10.1177/2472630320937003

Shajahan A, Supekar NT, Chapla D, Heiss C, Moremen KW, Azadi P. (2020) Simplifying glycan profiling through a high-throughput Micropermethylation strategy. SLAS TECHNOLOGY: Translating Life Sciences Innovation. 25(4):367-79. Aug 2020. https://doi.org/10.1177/2472630320912929

Wong JE, Gysel K, Birkefeldt TG, Vinther M, Muszyński A, Azadi P, Laursen NS, Sullivan JT, Ronson CW, Stougaard J, Andersen KR. (2020) Structural signatures in EPR3 define a unique class of plant carbohydrate receptors. Nature communications. 11(1):1-8. Jul 30, 2020. https://doi.org/10.1038/s41467-020-17568-9

Talabnin K, Talabnin C, Kumagai T, Sutatum N, Khiaowichit J, Dechsukhum C, Ishihara M, Azadi P, Sripa B. (2020) Ganglioside GM2: A potential biomarker for cholangiocarcinoma. Journal of International Medical Research. 48(7):0300060520903216. Jul 2020. https://doi.org/10.1177/0300060520903216

Lunin VV, Wang HT, Bharadwaj VS, Alahuhta M, Peña MJ, Yang JY, Archer-Hartmann SA, Azadi P, Himmel ME, Moremen KW, York WS. (2020) Molecular mechanism of polysaccharide acetylation by the Arabidopsis xylan O-acetyltransferase XOAT1. The Plant Cell. 32(7):2367-82. Jul 2020. https://doi.org/10.1105/tpc.20.00028

Wenzel CQ, Mills DC, Dobruchowska JM, Vlach J, Nothaf H, Nation P, Azadi P,Melville SB, Carlson RW, Feldman MF, Szymanski CM. (2020) An atypical lipoteichoic acid from Clostridium perfringens elicits a broadly cross-reactive and protective immune response. Journal of Biological Chemistry. May 18, 2020. doi.org/10.1074/jbc.RA119.009978

Ticar BF, Rohmah Z, Neri TAN, Pahila IG, Vasconcelos A, Archer-Hartmann SA, Reiter CEN, Dobruchowska JM, Choi BD, Heiss C, Azadi P, Pomin VH. (2020) Biocompatibility and structural characterization of glycosaminoglycans isolated from heads of silver-banded whiting (Sillago argentifasciata Martin & Montalban 1935). International Journal of Biological Macromolecules, 151 :663-676. May 15, 2020. doi.org/10.1016/j.ijbiomac.2020.02.160

Shajahan A, Supekar NT, Chapla D, Heiss C, Moremen KW, Azadi P. (2020) Simplifying Glycan Profiling through a High-Throughput Micropermethylation Strategy. SLAS TECHNOLOGY: Translating Life Sciences Innovation. May 4, 2020. doi.org/10.1177/2472630320912929

Wolferen M van, Shajahan A, Heinrich K, Brenzinger S, Black IM, Wagner A, Briegel A, Azadi P, Albers SV. (2020) Species-specific recognition of Sulfolobales mediated by UV-inducible pili and S-layer glycosylation patterns. Mbio 11(2):e03014-19. Mar 10, 2020. doi.org/10.1128/mBio.03014-19. PMID: 32156822

Kittur FS, Hung CY, Zhu C, Shajahan A, Azadi P, Thomas MD, Pearce JL, Gruber C, Kallolimath S, Xie J. (2020) Glycoengineering tobacco plants to stably express recombinant human erythropoietin with different N-glycan profiles. Elsevier, 157:158-169. Apr 26 2020. doi.org/10.1016/j.ijbiomac.2020.04.199

Ma X, Li Y, Kondo Y, Shi H, Han J, Jiang Y, Bai X, Archer-Hartmann SA, Azadi P, Ruan C, Fu J, Xia L.(2020) Slc35a1 deficiency causes thrombocytopenia due to impaired megakaryocytopoiesis and excessive platelet clearance in the liver. Haematologica. Apr 2020. doi.org/10.3324/haematol.2019.225987. PMID:32303557

Porfirio S, Archer-Hartmann SA, Moreau GB, Ramakrishnan G, Haque R, Kirkpatrick BD, Petri WA, Azadi P. (2020) New strategies for profiling and characterization of human milk oligosaccharides. Glycobiology, cwaa028. Apr 2, 2020. doi.org/10.1093/glycob/cwaa028

Shajahan A, Supekar NT, Heiss C, Azadi P. (2020) Exploring the scope of high throughput micro‐permethylation based glycomics. The FASEB Journal , 34(S1):1-1. Apr 18, 2020. doi.org/10.1096/fasebj.2020.34.s1.06510

Sacher JC, Shajahan A, Butcher J, Patry RT, Flint A, Hendrixson DR, Stintzi A, Azadi P, Szymanski CM.(2020) Binding of phage-encoded FlaGrab to motile Campylobacter jejuni flagella inhibits growth, downregulates energy metabolism, and requires specific flagellar glycans. Front. Microbiol., 11:397. Mar 20, 2020. doi.org/10.3389/fmicb.2020.00397

Park Y, Kim D, Boorgula GD, Schutter KD, Smagghe G, Šimo L, Archer-Hartmann SA, Azadi P.(2020) Alpha-Gal and Cross-Reactive Carbohydrate Determinants in the N-Glycans of Salivary Glands in the Lone Star Tick, Amblyomma americanum. Vaccines 2020, 8(1):18. Jan 9, 2020. doi.org/10.3390/vaccines8010018

Garber JM, Nothaft H, Pluvinage B, Stahl M, Bian X, Porfirio S, Enriquez A, Butcher J, Huang H, Glushka J, Line E, Gerlt JA, Azadi P, Stintzi A, Boraston AB, Szymanski CM.(2020) The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus. Commun Biol 3,2(2020), 3(1):1-11. Jan 7, 2020. doi.org/10.1038/s42003-019-0727-5

Shajahan A, Supekar NT, Wu H, Wands AM, Bhat G, Kalimurthy A, Matsubara M, Ranzinger R, Kohler JJ, Azadi P. (2020) Mass spectrometric method for the unambiguous profiling of cellular dynamic glycosylation. bioRxiv. May 5, 2020. doi.org/10.1101/2020.05.04.075655

Shajahan A, Archer-Hartmann SA, Supekar NT, Gleinich AS, Heiss C, Azadi P.(2020) Comprehensive characterization of N-and O-glycosylation of SARS-CoV-2 human receptor angiotensin converting enzyme 2. bioRxiv. May 2, 2020. doi.org/10.1101/2020.05.01.071688

Lunin V, Wang HT, Bharadwaj V, Alahuhta PM, Pena MJ, Yang JY, Archer-Hartmann SA, Azadi P, Himmel M, Moremen KW, York WS, Bomble YJ, Urbanowicz B.(2020)Molecular mechanism of polysaccharide acetylation by the Arabidopsis xylan O-acetyltransferase XOAT1. The Plant Cell. April 2020.doi.org/10.1105/tpc.20.00028. PMID: 32354790

Shajahan A, Supekar NT, Gleinich AS, Azadi P.(2020) Deducing the N-and O-glycosylation profile of the spike protein of novel coronavirus SARS-CoV-2. bioRxiv. Apr. 6, 2020. doi.org/10.1101/2020.04.01.020966

Wolferen M van, Shajahan A, Heinrich K, Brenzinger S, Black IM, Wagner A, Briegel A, Azadi P, Albers SV.(2020)Species-specific recognition of Sulfolobales mediated by UV-inducible pili and S-layer glycosylation patterns. Molecular Biology and Physiology. doi.org/10.1128/mBio.03014-19.Epub 2020 Mar 10. PMID: 32156822

Urbanowicz B, Lunin V, Wang HT, Bharadwaj V, Alahuhta PM, Pena MJ, Yang JY, Archer-Hartmann SA, Azadi P, Himmel M, Moremen KW, York WS, Bomble YJ.(2020) Structure of the Xylan O-Acetyltransferase AtXOAT1 Reveals Molecular Insight into Polysaccharide Acetylation in Plants. bioRxiv. Jan 17,2020. doi.org/10.1101/2020.01.16.909127

Long L, Azadi P, Chen R.(2020) Designer biocatalysts for direct incorporation of exogenous galactose into globotriose. Biotechnology and Bioengineering, 117(1), First published on Oct 21, 2019. doi.org/10.1002/bit.27198.

Ge Y, Gong M, Zadeh M, Li J, Abbott JR, Li W, Morel L, Sonon R, Supekar NT, Azadi P, Wang Y, Jones DP, Li S, Mohamadzadeh M.(2020) Regulating colonic dendritic cells by commensal glycosylated large surface layer protein A to sustain gut homeostasis against pathogenic inflammation.Mucosal Immunol 13, 34–46 (2020). doi.org/10.1038/s41385-019-0210-0

De Leoz MLA, Duewer D, Fung A, Liu L, Yau HK, Archer-Hartmann SA, Azadi P, Said N, et al.(2020) NIST interlaboratory study on glycosylation analysis of monoclonal antibodies: comparison of results from diverse analytical methods. Molecular & Cellular Proteomics Jan 1, 2020, First published on Oct 7, 2019, 19 (1).doi.org/10.1074/mcp.RA119.001677. Epub 2020 Jan 1. PMID:31591262

Zhong R, Cui D, Richardson EA, Phillips DR, Azadi P, Lu G, Ye ZH.(2020) Cytosolic Acetyl-CoA generated by ATP-citrate lyase is essential for acetylation of cell wall polysaccharides. Plant and Cell Physiology, Jan 2020; 61(1): 64-75. doi.org/10.1093/pcp/pcz178

2019

Corti F, Wang Y, Rhodes JM, Atri D, Archer-Hartmann S, Zhang J, Zhuang ZW, Chen D, Wang T, Wang Z, Azadi P, Simons M.  (2019) Publisher Correction: N-terminal syndecan-2 domain selectively enhances 6-O heparin sulfate chains sulfation and promotes VEGFA₁₆₅-dependent neovascularization.  Nat Commun. May 7;10(1):2124. doi: 10.1038/s41467-019-10205-0.  PMID:31064993  PMCID:PMC6504881

Corti F, Wang Y, Rhodes JM, Atri D, Archer-Hartmann S, Zhang J, Zhuang ZW, Chen D, Wang T, Wang Z, Azadi P, Simons M. (2019) N-terminal syndecan-2 domain selectively enhances 6-O heparin sulfate chains sulfation and promotes VEGFA₁₆₅-dependent neovascularization. Nat Commun. Apr 5;10(1):1562. doi: 10.1038/s41467-019-09605-z. Erratum in: Nat Commun. 2019 May 7;10(1):2124.  PMID:30952866  PMCID:PMC6450910

Crispell G, Commins S, Archer-Hartman SA, Choudhary S, Dharmarajan, Azadi P, Karim S.  (2019) Discovery of Alpha-Gal-Containing antigens in North American tick species believed to induce red meat allergy.  Front. Immunol., 12 May 2019 10:1056. doi.org/10/3389/fimmu.2019.01056.

Hershey, DM, Porfirio S, Jaehrig B, Heiss C, Azadi P, Fiebig A, Crosson S. (2019) Composition of the holdfast polysaccharide from Caulobacter crescentus. Apr. 9, 2019  bioRxiv doi:https://doi.org/10.1 10/602995.

Coleman CM, Auker KM, Killday KB, Azadi P, Black I, Ferreira D. (2019) Arabinoxyloglucan oligosaccharides may contribute to the anti-adhesive properties of porcine urine after cranberry consumption. J Nat Prod. Mar 22;82(3):589-605. doi: 10.1021/acs.jnatprod.8b01043. Epub 2019 Mar 15.  PMID:30873836

Porfírio S, Carlson RW, Azadi P. (2019) Elucidating peptidoglycan structure: An analytical toolset.  Trends Microbiol. Mar 2. pii: S0966-842X(19)30022-8. doi: 10.1016/j.tim.2019.01.009. [Epub ahead of print] Review.  PMID:30833206

Chung D, Sarai NS, Knott BC, Hengge N, Russell JF, Yarbrough JM, Brunecky R, Young J, Supekar N, Wall TV, Sammond DW, Crowley MF, Szymanski CM, Wells L, Azadi P, Westpheling J, Jimmel ME, Bomble YJ.  (2019) Glycosylation is vital for industrial performance of hyperactive cellulases. ACS Sustainable Chem. Eng. 7,7,4792-4800. Dwv. 1, 2019. doi.org/a0.1021/acssuschemeng.8b05049.

Evert C, Loesekann T, Bhat G, Shajahan A, Sonon R, Azadi P, Hunter RC.(2019)  Generation of ¹³C-labeled MUC5AC mucin oligosaccharides for stable isotope probing of host-associated microbial communities.  ACS Infect Dis.  Mar 8;5(3):385-393. doi: 10.1021/acsinfecdis.8b00296. Epub 2019 Jan 24.  PMID:30623643

Sheeley DM, Azadi P, Pohl NL. (2019) Emerging Technologies to Bring Glycoproteomics Within Reach. Journal of Biomolecular Techniques, 30(Suppl):S48-S49. Dec 2019. PMCID:PMC6938069

Heiss C, Wang Z, Thurlow CM, Hossain MJ, Sun D, Liles MR, Saper MA, Azadi P. (2019) Structure of the capsule and lipopolysaccharide O-antigen from the channel catfish pathogen, Aeromonas hydrophila. Carbonhydrate research, 486: 107858. Dec 1, 2019. doi.org/10.1016/j.carres.2019.107858

Crippen CS, Lee YJ, Hutinet G, Shajahan A, Sacher JC, Azadi P, Crécy-Lagard V de, Weigele PR, Szymanski CM. (2019) Deoxyinosine and 7-deaza-2-deoxyguanosine as carriers of genetic information in the DNA of Campylobacter viruses. Journal of virology, 93(23). Dec 1, 2019. doi.org/10.1128/JVI.01111-19. PMID: 31511377

Black IM, Heiss C, Azadi P. (2019) Comprehensive monosaccharide composition analysis of insoluble polysaccharides by permethylation to produce methyl alditol derivatives for gas chromatography/mass spectrometry. Analytical Chemistry, 91(21):13787-13793. Sep 30, 2019. doi.org/10.1021/acs.analchem.9b03239

Pan H, Colville MJ, Supekar NT, Azadi P, Paszek MJ. (2019) Sequence-Specific Mucins for Glycocalyx Engineering. ACS synthetic biology, 8(10):2315-2326. Sep 9, 2019. doi.org/10.1021/acssynbio.9b00127

Hershey DM, Porfirio S, Black IM, Jaehrig B, Heiss C, Azadi P, Fiebig A, Crosson S. (2019) Composition of the holdfast polysaccharide from Caulobacter crescentus. Journal of bacteriology, 201(17): e00276-19. Sep 1, 2019. doi.org/10.1128/JB.00276-19. PMID: 31209074

Jain M, Black IM, Hawara E, Azadi P, Carlson R, Ma W, Jones KMM, Gabriel DW. (2019) Very long chain fatty acid modification of Liberibacter crescens lipid A may be essential for culturability. Plant Health 2019, Aug 5, 2019.

Porfirio S, Carlson RW, Azadi P. (2019) Elucidating Peptidoglycan Structure: An Analytical Toolset:(Trends in Microbiology 27, 607–622; 2019). Trends in microbiology, 27(7):653-654. Jul 1, 2019. doi.org/10.1016/j.tim.2019.04.007

2018

Shajahan A, Supekar N, Heiss C, Azadi P. (2019) High-throughput automated micro-permethylation for glycan structure analysis.  Anal Chem. Jan 15;91(2):1237-1240. doi: 10.1021/acs.analchem.8b05146. Epub 2018 Dec 21.  PMID:30572707

Qiu H, Shi S, Yue J, Xin M, Nairn AV, Lin L, Liu X, Li G, Archer-Hartmann SA, Dela Rosa M, Galizzi M, Wang S, Zhang F, Azadi P, van Kuppevelt TH, Cardoso WV, Kimata K, Ai X, Moremen KW, Esko JD, Linhardt RJ, Wang L.  (2018)  A mutant-cell library for systematic analysis of heparin sulfate structure-function relationships.  Nat Methods. Nov;15(11):889-899. doi: 10.1038/s41592-018-0189-6. Epub 2018 Oct 30.  PMID:30377379  PMCID:PMC6214364

Spiciarich DR, Oh ST, Foley A, Hughes SB, Mauro MJ, Abdel-Wahab O, Press RD, Viner R, Thompson SL, Chen Q, Azadi P, Bertozzi CR, Maxson JE. (2018)  A novel germline variant in CSF3R reduces N-glycosylation and exerts potent oncogenic effects in leukemia.  Cancer Res. Dec 15;78(24):6762-6770. doi: 10.1158/0008-5472.CAN-18-1638. Epub 2018 Oct 22.  PMID:30348809  PMCID:PMC6295230

Zarnowski R, Sanchez H, Covelli AS, Dominguez E, Jaromin A, Bernhardt J, Mitchell KF, Heiss C, Azadi P, Mitchell A, Andes DR.  (2018) Candida albicans biofilm-induced vesicles confer drug resistance through matrix biogenesis.  PLoS Biol. Oct 8;16(10):e2006872. doi: 10.1371/journal.pbio.2006872. eCollection 2018 Oct.  PMID:30296253  PMCID:PMC6209495

Chen H, Ambadapadi S, Wakefield D, Bartee M, Yaron JR, Zhang L, Archer-Hartmann SA, Azadi P, Burgin M, Borges C, Zheng D, Ergle K, Muppala V, Morshed S, Rand K, Clapp W, Proudfoot A, Lucas A.  (2018)  Selective deletion of heparin sulfotransferase enzyme, Ndst1, in donor endothelial and myeloid precursor cells significantly decreases acute allograft rejection.  Sci Rep. Sep 7;8(1):13433. doi: 10.1038/s41598-018-31779-7.  PMID:30194334  PMCID:PMC6128922

Byrne G, O’Rourke SM, Alexander DL, Yu B, Doran RC, Wright M, Chen Q, Azadi P, Berman PW.  (2018) CRISPR/Cas9 gene editing for the creation of an MGAT1-deficient CHO cell line to control HIV-1 vaccine glycosylation.  PLoS Biol. Aug 29;16(8):e2005817. doi: 10.1371/journal.pbio.2005817. eCollection 2018 Aug.  PMID:30157178 PMCID:PMC6133382

Zhang P, Lu H, Peixoto RT, Pines MK, Ge Y, Oku S, Siddiqui TJ, Xie Y, Wu W, Archer-Hartmann S, Yoshida K, Tanaka KF, Aricescu AR, Azadi P, Gordon MD, Sabatini BL, Wong ROL, Craig AM.  (2018) Heparan sulfate organizes neuronal synapses through neurexin partnerships.  Cell. Sep 6;174(6):1450-1464.e23. doi: 10.1016/j.cell.2018.07.002. Epub 2018 Aug 9.  PMID:30100184  PMCID:PMC6173057

Kang X, Kirui A, Muszyński A, Widanage MCD, Chen A, Azadi P, Wang P, Mentink-Vigier F, Wang T. (2018) Molecular architecture of fungal cell walls revealed by solid-state NMR.  Nat Commun. Jul 16;9(1):2747. doi: 10.1038/s41467-018-05199-0.  PMID:30013106  PMCID:PMC6048167

Guan N, Shin HD, Long L, Azadi P, Chen R. (2018)  TCA cycle-powered synthesis of fucosylated oligosaccharides.  Glycobiology. Jul 1;28(7):468-473. doi: 10.1093/glycob/cwy047.  PMID:29800149

Muszyński A, Heiss C, Hjuler CT, Sullivan JT, Kelly SJ, Thygesen MB, Stougaard J, Azadi P, Carlson RW, Ronson CW. (2018)  Structures of exopolysaccharides involved in receptor-mediated perception of Mesorhizobium loti by Lotus japonicas. J Biol Chem. Apr 6;293(14):5376. doi: 10.1074/jbc.AAC118.002877. No abstract available.  PMID:29626109  PMCID:PMC5892561

Dominguez E, Zarnowski R, Sanchez H, Covelli AS, Westler WM, Azadi P, Nett J, Mitchell AP, Andes DR.  (2018) Conservation and divergence in the Candida species biofilm matrix mannan-glucan complex structure, function and genetic control.  MBio. Apr 3;9(2). pii: e00451-18. doi: 10.1128/mBio.00451-18.  PMID:29615504  PMCID:PMC588503

Flanagan-Steet H, Christian C, Lu PN, Aarnio-Peterson M, Sanman L, Archer-Hartmann S, Azadi P, Bogyo M, Steet RA.  (2018) TGF-b regulates cathepsin activation during normal and pathogenic development.  Cell Rep. Mar 13;22(11):2964-2977. doi: 10.1016/j.celrep.2018.02.066.  PMID:29539424  PMCID:PMC6247414

Chen Y, Bensing BA, Seepersaud R, Mi W, Liao M, Jeffrey PD, Shajahan A, Sonon RN, Azadi P, Sullam PM, Rapoport TA. (2018) Unraveling the sequence of cytosolic reaction in the export of GspB adhesion from Streptococcus gordonii.  J Biol Chem. Apr 6;293(14):5360-5373. doi: 10.1074/jbc.RA117.000963. Epub 2018 Feb 9.  PMID:29462788  PMCID:PMC5892584

Shang-Guan K, Wang M, Htwe NMPS, Li P, Li Y, Qi F, Zhang D, Cao M, Kim C, Weng H, Cen H, Black IM, Azadi P, Carlson RW, Stacey G, Liang Y. (2018) Lipopolysaccharides trigger two successive bursts of reactive oxygen species at distinct cellular locations.  Plant Physiol. Mar;176(3):2543-2556. doi: 10.1104/pp.17.01637. Epub 2018 Feb 5.  PMID:29431629  PMCID:PMC5841728

Talabnin K, Talabnin C, Ishihara M, Azadi P.  (2018) Increased expression of the high-mannose M6N2 and NeuAc3H3N3M3N2F triantennary N-glycans in cholangiocarcinoma.  Oncol Lett. Jan;15(1):1030-1036. doi: 10.3892/ol.2017.7384. Epub 2017 Nov 9.  PMID:29399163  PMCID:PMC5772869

Rapicavoli JN, Blanco-Ulate B, Muszyński A, Figueroa-Balderas R, Morales-Cruz A, Azadi P, Dobruchowska JM, Castro C, Cantu D, Roper MC. (2018) Lipopolysaccharide O-antigen delays plant innate immune recognition of Xylella fastidiosa.  Nat Commun. Jan 26;9(1):390. doi: 10.1038/s41467-018-02861-5.  PMID:29374171  PMCID:PMC5786101

Tanigaki K, Sacharidou A, Peng J, Chambliss KL, Yuhanna IS, Ghosh D, Ahmed M, Szalai AJ, Vongpatanasin W, Mattrey RF, Chen Q, Azadi P, Lingvay I, Botto M, Holland WL, Kohler JJ, Sirsi SR, Hoyt K, Shaul PW, Mineo C. (2018)  Hyposialylated IgG activates endothelial IgG receptor FcyRIIB to promote obesity-induced insulin resistance.  J Clin Invest. Jan 2;128(1):309-322. doi: 10.1172/JCI89333. Epub 2017 Nov 27.  PMID:29202472  PMCID:PMC5749535

Amore A, Knott BC, Supekar NT, Shajahan A, Azadi P, Zhao P, Wells L, Linger JG, Hobdey SE, Vander Wall TA, Shollenberger T, Yarbrough JM, Tan Z, Crowley MF, Himmel ME, Decker SR, Beckham GT, Taylor LE 2nd.  (2017)  Distinct roles of N- and O-glycans in cellulase activity and stability.  Proc Natl Acad Sci U S A. Dec 26;114(52):13667-13672. doi: 10.1073/pnas.1714249114. Epub 2017 Dec 11.  PMID:29229855  PMCID:PMC5748201

Hamilton BS, Wilson JD, Shumakovich MA, Fisher AC, Brooks JC, Pontes A, Naran R, Heiss C, Gao C, Kardish R, Heimburg-Molinaro J, Azadi P, Cummings RD, Merritt JH, DeLisa MP.  (2017) A library of chemically defined human N-glycans synthesized from microbial oligosaccharide precursors.  Sci Rep. Nov 21;7(1):15907. doi: 10.1038/s41598-017-15891-8.  PMID:29162910  PMCID:PMC5698433

Kolinko S, Wu YW, Tachea F, Denzel E, Hiras J, Gabriel R, Bäcker N, Chan LJG, Eichorst SA, Frey D, Chen Q, Azadi P, Adams PD, Pray TR, Tanjore D, Petzold CJ, Gladden JM, Simmons BA, Singer SW. (2018)   A bacterial pioneer produces cellulose complexes that persist through community succession.  Nat Microbiol. Jan;3(1):99-107. doi: 10.1038/s41564-017-0052-z. Epub 2017 Nov 6.  PMID:29109478

2017

Sheikh MO, Thieker D, Chalmers G, Schafer CM, Ishihara M, Azadi P, Woods RJ, Glushka JN, Bendiak B, Prestegard JH, West CM. (2017)  O₂ sensing-associated glycosylation exposes the F-box-combining site of the Dictyostelium Skp1 subunit in E3 ubiquitin ligases.  J Biol Chem. Nov 17;292(46):18897-18915. doi: 10.1074/jbc.M117.809160. Epub 2017 Sep 19.  PMID:28928219  PMCID:PMC5704474

Shajahan A, Supekar NT, Heiss C, Ishihara M, Azadi P. (2017)  Tool for rapid analysis of glycopeptide by permethylation via one-pot site mapping and glycan analysis.  Anal Chem. Oct 17;89(20):10734-10743. doi: 10.1021/acs.analchem.7b01730. Epub 2017 Oct 2. PMID:28921966  PMCID:PMC5973789

Li Y, Fu J, Ling Y, Yago T, McDaniel JM, Song J, Bai X, Kondo Y, Qin Y, Hoover C, McGee S, Shao B, Liu Z, Sonon R, Azadi P, Marth JD, McEver RP, Ruan C, Xia L. (2017)  Sialylation on O-glycans protects platelets from clearance by liver Kupffer cells.  Proc Natl Acad Sci U S A. Aug 1;114(31):8360-8365. doi: 10.1073/pnas.1707662114. Epub 2017 Jul 17. PMID:28716912  PMCID:PMC5547648

Matsuzaki C, Takagaki C, Tomabechi Y, Forsberg LS, Heiss C, Azadi P, Matsumoto K, Katoh T, Hosomi K, Kunisawa J, Yamamoto K, Hisa K.  (2017)  Structural characterization of the immunostimulatory exopolysaccharide produced by Leuconostoc mesenteroides strain NTM048.  Carbohydr Res. Aug 7;448:95-102. doi: 10.1016/j.carres.2017.06.004. Epub 2017 Jun 15.  PMID:28633071

Shajahan A, Heiss C, Ishihara M, Azadi P. (2017)  Glycomic and glycoproteomic analysis of glycoproteins-a tutorial.  Anal Bioanal Chem. Jul;409(19):4483-4505. doi: 10.1007/s00216-017-0406-7. Epub 2017 Jun 6.  PMID:28585084  PMCID:PMC5498624

Lowery CL 3rd, Elliott C, Cooper A, Hadden C, Sonon RN, Azadi P, Williams DK, Marsh JD, Woulfe DS, Kilic F.  (2017)  Cigarette smoking-associated alterations in serotonin/adrenalin signaling pathways of platelets.  J Am Heart Assoc. May 18;6(5). pii: e005465. doi: 10.1161/JAHA.116.005465.  PMID:28522678  PMCID:PMC5524091

Woo CM, Felix A, Byrd WE, Zuegel DK, Ishihara M, Azadi P, Iavarone AT, Pitteri SJ, Bertozzi CR.  (2017) Development of IsoTaG, a chemical glycoproteomics technique for profiling intact N- and O-glycopeptides from whole cell proteomes.  J Proteome Res. Apr 7;16(4):1706-1718. doi: 10.1021/acs.jproteome.6b01053. Epub 2017 Feb 28.  PMID:28244757  PMCID:PMC5507588

Kintz E, Heiss C, Black I, Donohue N, Brown N, Davies MR, Azadi P, Baker S, Kaye PM, van der Woude M. (2017) Salmonella enterica serovar typhi lipopolysaccharide O-antigen modification impact on serum resistance and antibody recognition.  Infect Immun. Mar 23;85(4). pii: e01021-16. doi: 10.1128/IAI.01021-16. Print 2017 Apr.  PMID:28167670  PMCID:PMC5364305

2016

Edgar RJ, Chen J, Kant S, Rechkina E, Rush JS, Forsberg LS, Jaehrig B, Azadi P, Tchesnokova V, Sokurenko EV, Zhu H, Korotkov KV, Pancholi V, Korotkova N. (2016)  SpyB, a small heme-binding protein, affects the composition of the cell wall in Streptococcus pyogenes.  Front Cell Infect Microbiol. Oct 13;6:126. eCollection 2016.  PMID:27790410   PMCID:PMC5061733

Starr KF, Porsch EA, Seed PC, Heiss C, Naran R, Forsberg LS, Amit U, Yagupsky P, Azadi P, St Geme JW 3rd.  (2016)  Kingella kingae expresses four structurally distinct polysaccharide capsules that differ in their correlation with invasive disease.  PLoS Pathog. Oct 19;12(10):e1005944. doi: 10.1371/journal.ppat.1005944. eCollection 2016 Oct.  PMID:27760194  PMCID:PMC5070880

Alcántara MÁ, Dobruchowska J, Azadi P, García BD, Molina-Heredia FP, Reyes-Sosa FM.  (2016) Recalcitrant carbohydrates after enzymatic hydrolysis of pretreated lignocellulosic biomass.  Biotechnol Biofuels. Oct 6;9:207. eCollection 2016.  PMID:27713766  PMCIDPMC5052873

Zong C, Huang R, Condac E, Chiu Y, Xiao W, Li X, Lu W, Ishihara M, Wang S, Ramiah A, Stickney M, Azadi P, Amster IJ, Moremen KW, Wang L, Sharp JS, Boons GJ. (2016)  Integrated approach to identify heparin sulfate ligand requirement of Robo1.  J Am Chem Soc. Oct 5;138(39):13059-13067. Epub 2016 Sep 27.  PMID:27611601  PMCID:PMC5068570

Muszyński A, Heiss C, Hjuler CT, Sullivan JT, Kelly SJ, Thygesen MB, Stougaard J, Azadi P, Carlson RW, Ronson CW.  (2016)  Structures of exopolysaccharides involved in receptor-mediated perception of mesorhizobium loti by Lotus japonicas.  J Biol Chem. Sep 30;291(40):20946-20961. Epub 2016 Aug 8. Erratum in: J Biol Chem. 2018 Apr 6;293(14):5376.  PMID:27502279  PMCID:PMC5076507

Mehta N, Porterfield M, Struwe WB, Heiss C, Azadi P, Rudd PM, Tiemeyer M, Aoki K.  (2016) Mass spectrometric quantification of N-linked glycans by reference to exogenous standards.  J Proteome Res. Sep 2;15(9):2969-80. doi: 10.1021/acs.jproteome.6b00132. Epub 2016 Aug 5.  PMID:27432553  PMCID:PMC5501980

Valentine JL, Chen L, Perregaux EC, Weyant KB, Rosenthal JA, Heiss C, Azadi P, Fisher AC, Putnam D, Moe GR, Merritt JH, DeLisa MP. (2016) Immunization with outer membrane vesicles displaying designer glycotopes yields class-switched, glycan-specific antibodies.  Cell Chem Biol. Jun 23;23(6):655-65. doi: 10.1016/j.chembiol.2016.05.014.  PMID:27341433  PMCID:PMC5116915

Chen L, Valentine JL, Huang CJ, Endicott CE, Moeller TD, Rasmussen JA, Fletcher JR, Boll JM, Rosenthal JA, Dobruchowska J, Wang Z, Heiss C, Azadi P, Putnam D, Trent MS, Jones BD, DeLisa MP. (2016) Outer membrane vesicles displaying engineered glycotopes elicit protective antibodies.  Proc Natl Acad Sci U S A. Jun 28;113(26):E3609-18. doi: 10.1073/pnas.1518311113. Epub 2016 Jun 6.  PMID:27274048  PMCID:PMC4932928

Talabnin K, Talabnin C, Ishihara M, Azadi P, Wongkham S, Sripa B.  (2016) Differential expression of O-glycoprotein glycans in cholangiocarcinoma cell lines.  Asian Pac J Cancer Prev. 17(2):691-5.  PMID:26925665  PMCID:PMC4809418

Ma L, Chen Z, Huang da W, Kutty G, Ishihara M, Wang H, Abouelleil A, Bishop L, Davey E, Deng R, Deng X, Fan L, Fantoni G, Fitzgerald M, Gogineni E, Goldberg JM, Handley G, Hu X, Huber C, Jiao X, Jones K, Levin JZ, Liu Y, Macdonald P, Melnikov A, Raley C, Sassi M, Sherman BT, Song X, Sykes S, Tran B, Walsh L, Xia Y, Yang J, Young S, Zeng Q, Zheng X, Stephens R, Nusbaum C, Birren BW, Azadi P, Lempicki RA, Cuomo CA, Kovacs JA. (2016) Genome analysis of three pneumocystis species reveals adaption mechanisms to life exclusively in mammalian hosts.  Nat Commun. Feb 22;7:10740. doi: 10.1038/ncomms10740.  PMID:26899007  PMCID:PMC4764891

Spears PA, Havell EA, Hamrick TS, Goforth JB, Levine AL, Thomas Abraham S, Heiss C, Azadi P, Orndorff PE. (2016) Listeria monocytogenes All Teichoic Acid Decoration in Virulence and Cell-to-Cell Spread. Mol Microbiol. 2016 Feb 12. doi: 10.1111/mmi.13353. [Epub ahead of print] PMID:26871418

Porfirio S, Calado ML, Noceda C, Cabrita MJ, Gomes da Salva MD, Azadi P, Peixe A. (2016) Tracking biochemical changes during adventitious root formation in olive (Olea europaea) Scientia Horticulturae 204, June 2, 41-53 doi:10.1016/j.scienta.2016.03.029

Porfírio S, Gomes da Silva MD, Cabrita MJ, Azadi P, Peixe A. (2016) Reviewing current knowledge on olive (Olea europaea L.) adventitious root formation. Scientia Horticulturae 198. January, 207-226. doi:10.1016/j.scienta.2015.11.034

Heiss C, Azadi P. (2016) Structural Analysis of Glycosaminoglycans—An Indispensable Tool for the Diagnosis, Treatment and Prevention of Human Disease. Glycobiology and Human Diseases. Book Chapter, pgs. 28-64

Talabin K, Talabnin C, Ishihara M, Azadi P, Wongkham S, Sripa B. (2016) Differential Expression of O-glycoprotein glycans in Cholangiocarcinoma Cell Lines. Asian Pac J Cancer Prev. 17(2):691-5. PMID: 26925665

Ma L, Chen Z, Huang da W, Kutty G, Ishihara M, Wang H, Abouelleil A, Bishop L, Davey E, Deng R, Deng X, Fan L, Fantoni G, Fitzgerald M, Gogineni E, Goldberg JM, Handley G, Hu X, Huber C, Jiao X, Jones K, Levin JZ, Liu Y, Macdonald P, Melnikov A, Raley C, Sassi M, Sherman BT, Song X, Sykes S, Tran B, Walsh L, Xia Y, Yang J, Young S, Zeng Q, Zheng X, Stephens R, Nusbaum C, Birren BW, Azadi P, Lempicki RA, Cuomo CA, Kovacs JA. (2016) Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts. Nat Commun. Feb 22;7:10740. doi: 10.1038/ncomms10740. PMID:26899007

Porfírio S, Gomes da Silva MD, Peixe A, Cabrita MJ, Azadi P. (2016) Current analytical methods for plant auxin quantification – A review. Anal Chim Acta. (2016)  Jan 1;902:8-21. doi: 10.1016/j.aca.2015.10.035. Epub 2015 Nov 6. Review. PMID:26703249

Heiss C, Wang Z, Black I, Azadi P, Fichorova RN, Singh BN. (2016) Novel structural features of the immunocompetent ceramide phospho-inositol glycan core from Trichomonas vaginalis. Carbohydr Res. 2016 Jan;419:51-9. doi: 10.1016/j.carres.2015.11.001. Epub 2015 Nov 10.PMID:26671321

2015

Ito H, Kaji H, Togayachi A, Azadi P, Ishihara M, Geyer R, Galuska C, Geyer H, Kakehi K, Kinoshita M, Karlsson NG, Jin C, Kato K, Yagi H, Kondo S, Kawasaki N, Hashii N, Kolarich D, Stavenhagen K, Packer NH, Thaysen-Andersen M, Nakano M, Taniguchi N, Kurimoto A, Wada Y, Tajiri M, Yang P, Cao W, Li H, Rudd PM, Narimatsu H. (2015) Comparison of analytical methods for profiling N- and O-linked glycans from cultured cell lines : HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study. Glycoconj J. 28 PMID: 26511985

Erikson E, Wratil PR, Frank M, Ambiel I, Pahnke K, Pino M, Azadi P, Izquierdo-UsernosN, Martinez-Picado J, Meier C. Schnaar RL, Crocker PR, Reutter W, Keppler OT. (2015) Mouse Siglec-1 Mediates trans-Infection of Surface-bound Murine Leukemia Virus in a Sialic Acid N-Acyl Side Chain-dependent Manner. The Journal of biological chemistry. 290(45):27345-59. PMID:26370074

Peres da Silva R, Heiss C, Black I, Azadi P, Gerlach JQ, Travassos LR, Joshi L, Kilcoyne M, Puccia R. (2015) Extracellular vesicles from Paracoccidioides pathogenic species transport polysaccharide and expose ligands for DC-SIGN receptors. Sci Rep. Sept 21;5:14213. Doi:10.1038/srep 14213. PMID 26387503

Zhong M, Zhang H, Reilly JP, Christie JD, Ishihara M, Kumagai T, Azadi P, Reilly MP. (2015) ABO Blood Group as a Model for Platelet Glycan Modification in Arterial Thrombosis. Arteriosclerosis, thrombosis and vascular biology. 35(7):1570-8. NIHMSID: MIHMS695666. PMID:25776750 PMCID: PMC4399047

Wikraiphat C, Saiprom N, Tandhavanant S, Heiss C, Azadi P, Wongsuvan G, Tuanyok A, Holden MT, Burtnick MN, Brett PJ, Peacock SJ, Chantratita N. (2015) Colony Morphology Variation of Burkholderia Pseudomallei is Associated with Antigenic Variation and O-Polysaccharide Modifications. Infect Immun. May 2015;83(5):2127-38. Doi:10.1128/IAI.02785-14. PMID: 25776750

Suarez G, Romero-Gallo J, Piazuelo M, Wang G, Maier R, Forsberg L, Azadi P, Gomez M, Correa P, Peek R. (2015) Modification of helicobacter pylori peptidoglycan enhances NOD1 activation and promotes cancers of the stomach. Journal of Cancer Research. DOI: 10.1158/008-5472. CAN-14-2291.Cancer Res. 2015 Apr 15;75(8):1749-59: doi: 10.1158/0008-5472.CAN-14-2291. PMID:25732381

Köseoğlu VK, Heiss C, Azadi P, Topchiy E, Güvener ZT, Lehmann TE, Miller KW, Gomelsky M. Listeria monocytogenes exopolysaccharide: origin, structure, biosynthetic machinery and c-di-GMP-dependent regulation. Mol Microbiol. 2015 May;96(4):728-43. . doi: 10.1111/mmi.12966. [Epub ahead of print ]  PMID:25662512

DePaoli-Roach A, Contreras C, Segvich D, Heiss C, Ishihara M, Azadi P, Roach P. (2015) Glycogen phosphomonoester distribution in mouse models of the progressive myoclonic epilepsy, Lafora disease. J Biol Chem. Jan 9; 290(2)841-850. doi: 10.1074/jbc.M114.607796. Epub 2014 Nov 21. PMID:25416783 PMCID:4294506

Lin N, Mascarenhas J, Sealover N, George H, Brooks J, Kayser K, Gau B, Yasa I, Azadi P, Archer-Hartmann S. (2015) Chinese hamster ovary (CHO) host cell engineering to increase sialylation of recombinant therapeutic proteins by modulating sialyltransferase expression. Biotechnol Prog. 2015 Mar;31(2) 334-346 doi: 10.1002/btpr.2038. PMID:25641927

2014

Nguyen TM, Chang S, Condon B, Thomas Tina, Azadi P. (2014) Thermal decomposition reactions of cotton fabric treated with piperazine-phosphonates derivatives as a flame retardant. Journal of Analytical and Applied Pyrolysis. November 2014 110:122-129 DOI: 10.1016/j.jaap.2014.08.006.

Brennan PJ, Tatituri RV, Heiss C, Watts GF, Hsu FF, Veerapen N, Cox LR, Azadi P, Besra GS, Brenner MB. (2014) Activation of iNKT cells by distinct constituent of the endogenous glucosylceramide fraction. Proc Natl Acad Sci. Sep 16;111(37):13433-8. Doi:10.1073/pnas.1415357111. Epub 2014 Sep 2. PubMed PMID: 25197085 PCMID:PMCA4169973

Piek S, Wang Z, Gunguly J, Lake AM Bartley SN, Mowlaboccus S, Anandan A, Stubbs KA, Scanlon MJ, Vrielink A, Azadi P, Carlson RW, Kahler CM. (2014) The role of oxidoreductases in determining the function of the neisserial lipid a phosphoethanolamine tranferase required for resistance to polymyxin. PLoS One. Sep 12:9(9):e106513. Doi: 10.1371/journal.pone.0106513. eCollection 2014. PMID 25215579 PCMID:PMC4162559

Yoneda A, Kuo HD, Ishihara M, Azadi P, Yu S, Ho TD. (2014) Glycosylation Variants of a β-Glucosidase Secreted by a Taiwanese Fungus, Chaetomella raphigera, Exhibit Variant-Specific Catalytic and Biochemical Properties Sep 2014 | PLOS ONE1371/journal.pone.0106306 PMID: 25180973 PMCID:PMC4152272

Azadi P, Ishihara M, Kumagai T, Stalnaker S, Zhang, Park S, Wells L, Tiemeyer M, Reilly M. (2014) Glycomics analysis of resting and activated human platelets (789.1) FASEB Journal April (28) No. 1, Supplement 789.1

Ballantyne R, Qu L, Liu J, Nairn A, Li W, Azadi P, Zhang H, Wells L, Tiemeyer M, Moremen K, Christie J, Li M, Zhou X Reilly M. (2014) Glycogenome signatures in complex cardiometabolic disease. (789.4) FASEB Journal. April (28) No. 1, Supplement 789.4

Zhang H, Mooney C, Ishihara M, Kumagai T, Stalnaker S, Park S, Veilion L, Hinkle C, Stout M, Yang W, VanDorn D, Chou S, Bhang DH, Ryeom S, Tiemeyer M, Wells L, Azadi P, Reilly M. (2014) ABO modulation of endothelial phenotypes and glycome profile in human induced pluripotent stem cell-derived endothelial cells (1003.2) FASEB Journal. April 28(1) Supplement 1003.2.

Kumar P, Heiss C, Santiago-Tirado FH, Black I, Azadi P, Doering TL. (2014) Pbx Proteins in Cryptococcus neoformans Cell Wall Remodeling and Capsule Assembly. Eukaryot Cell. May;13(5):560-71. doi: 10.1128/EC.00290-13. Epub 2014 Feb 28. PMID:24585882 PMCID:PMC4060484

Stone JK, Heiss C, Wang Z, Black I, Grasso SA, Koppisch AT, Azadi P, Keim P, Tuanyok A. (2014) Structural characterization of polysaccharides expressed by Burkholderia oklahomensis E0147.Carbohydr Res.  Mar 11;386:68-72. doi: 10.1016/j.carres.2013.08.011. Epub 2013 Aug 25.PMID: 24491843

Nasirikenari M, Veillon L, Collins CC, Azadi P, Lau JT. (2014) Remodeling of Marrow Hematopoietic Stem and Progenitor Cells by Non-self ST6Gal-1 Sialyltransferase. J Biol Chem. Mar 7;289(10):7178-7189. Epub 2014 Jan 14.  PMID:24425878 PCMID:PMC3945377

Zhang B, Xiao W, Qiu H, Zhang F, Moniz HA, Jaworski A, Condac E, Gutierrez-Sanchez G, Heiss C, Clugston RD, Azadi P, Greer JJ, Bergmann C, Moremen KW, Li D, Linhardt RJ, Esko JD, Wang L. (2014) Heparan sulfate deficiency disrupts developmental angiogenesis and causes congenital diaphragmatic hernia. J Clin Invest. 2014 Jan 2;124(1):209-21. doi: 10.1172/JCI71090. Epub 2013 Dec 20. PMID:24355925 PMCID:3871243

2013

Meng L, Forouhar F, Thieker D, Gao Z, Ramiah A, Moniz H, Xiang Y, Seetharaman J, Milaninia S, Su M, Bridger R, Veillon L, Azadi P, Kornhaber G, Wells L, Montelione GT, Woods RJ, Tong L, Moremen KW. (2013)  Enzymatic basis for N-glycan sialylation: structure of rat α2,6-sialyltransferase (ST6GAL1) reveals conserved and unique features for glycan sialylation. J Biol Chem.  Nov 29;288(48):34680-98. doi: 10.1074/jbc.M113.519041. Epub 2013 Oct 23.  PMID:24155237 PMCID:PMC3843080

Kittur FS, Bah M, Archer-Hartmann S, Hung CY, Azadi P, Ishihara M, Sane DC, Xie J. (2013),Cytoprotective effect of recombinant human erythropoietin produced in transgenic tobacco plants. PLoS One. 2013 Oct 4;8(10):e76468. doi: 10.1371/journal.pone.0076468. eCollection 2013. PMID:24124563 PMCID:PMC3790672

Starr KF, Porsch EA, Heiss C, Black I, Azadi P, St Geme JW 3rd. (2013) Characterization of the Kingella kingae polysaccharide capsule and exopolysaccharide. PLoS One.  Sep 30;8(9):e75409. doi: 10.1371/journal.pone.0075409. eCollection 2013.PMID:24098695 PMCID:PMC3787102

Mercado CP, Quintero MV, Li Y, Singh P, Byrd AK, Talabnin K, Ishihara M, Azadi P, Rusch NJ, Kuberan B, Maroteaux L, Kilic F. (2013)  A serotonin-induced N-glycan switch regulates platelet aggregation. Sci Rep.  Sep 30;3:2795. doi: 10.1038/srep02795. PMID:24077408 PMCID:PMC3786303

Heiss C, Burtnick MN, Roberts RA, Black I, Azadi P, Brett PJ. (2013) Revised structures for the predominant O-polysaccharides expressed by Burkholderia pseudomallei and Burkholderia mallei. Carbohydr Res.  Nov 15;381:6-11. doi: 10.1016/j.carres.2013.08.013. Epub 2013 Aug 24. PMID:24056008 PMCID:PMC3923507

Bubendorfer S, Ishihara M, Dohlich K, Heiss C, Vogel J, Sastre F, Panico M, Hitchen P, Dell A, Azadi P, Thormann KM. (2013) Analyzing the modification of the Shewanella oneidensis MR-1 flagellar filament. PLoS One.  Sep 6;8(9):e73444. doi: 10.1371/journal.pone.0073444. e Collection 2013.PMID:24039942 PMCID:3765264

Xu Y, Chen CF, Thomas TP, Azadi P, Diehl B, Tsai CJ, Brown N, Carlson JE, Tien M, Liang H. (2013) Wood chemistry analysis and expression profiling of a poplar clone expressing a tyrosine-rich peptide. Plant Cell Rep. Dec;32(12):1827-41. doi: 10.1007/s00299-013-1496-0. Epub 2013 Sep 7. PMID:24013761

Kataeva I, Foston M, Yang SJ, Pattathil S,  Biswal AK, Farris L. Poole II,  Basen M, Rhaesa AM, Thomas TP, Azadi P, Olman V, Saffold TD, Mohler KE,  Lewis DL, Doeppke C, Zeng Y, Tschaplinski, York WS, David M, Mohnen D, Xu Y, Ragauskas AJ, Ding SY, Kelly RM, Hahn M, Adams MWW. (2013) Carbohydrate and lignin are simultaneously solubilized from unpretreated switchgrass by microbial action at high temperature. Energy Environ, Sci. 6, 2186-2195. doi: 10.1039/C3EE40932E.

Bayne AC, Boltz D, Owen C, Betz Y, Maia G, Azadi P, Archer-Hartmann S, Zirkle R, Lippmeier JC. (2013) Vaccination against influenza with recombinant hemagglutinin expressed by Schizochytrium sp. confers protective immunity. PLoS One.  Apr 23;8(4):e61790. doi: 10.1371/journal.pone.0061790. Print 2013.PMID:23626728 PMCID:3634000

Layher JW Jr, Poling JS, Ishihara M, Azadi P, Alvarez-Manilla G, Puett D. (2013) A Possible Effectof Concentrated Oolong Tea Causing Transient Ischemic Attack-Like Symptoms. Br J Med Med Res. Jul 18;3(4):2157-2172. PMID:249000951; PMCID: PMC4041283.

Xu Y, Thammannagowda S, Thomas T, Azadi P, Schlarbaum SE, Liang H. (2013) LtuCAD1 Is a Cinnamyl Alcohol Dehydrogenase Ortholog Involved in Lignin Biosynthesis in Liriodendron tulipifera L., a Basal Angiosperm Timber Species. Plant Molecular Biology Reporter. May 31, pp1089-1099.

Heiss C, Skowyra ML, Liu H, Klutts JS, Wang Z, Williams M, Srikanta D, Beverley SM, Azadi P, Doering TL. (2013) Unusual galactofuranose modification of a capsule polysaccharide in the pathogenic yeast Cryptococcus neoformans. J Biol Chem. Apr 19;288(16):10994-1003. doi:10.1074/jbc.M112.441998. Epub 2013 Feb 13. PMID:23408430 PMCID:PMC3630864

2012

Burtnick MN, Heiss C, Schuler AM, Azadi P, Brett PJ. (2012) Development of novel O-polysaccharide based glycoconjugates for immunization against glanders. Front Cell Infect Microbiol.  Nov 27;2:148. doi: 10.3389/fcimb.2012.00148. eCollection 2012.PMID:23205347 PCMID:PMC3506924

Heiss C, Burtnick MN, Black I, Azadi P, Brett PJ. (2012) Detailed structural analysis of the O-polysaccharide expressed by Burkholderia thailandensis E264. Carbohydr Res. 2012 Dec 1;363:23-8. doi: 10.1016/j.carres.2012.09.027. Epub 2012 Oct 11. PMID:23103510 PCMID:PMC3496072

Cline A, Gao N, Flanagan-Steet H, Sharma V, Rosa S, Sonon R, Azadi P, Sadler KC, Freeze HH, Lehrman MA, Steet R. (2012)A zebrafish model of PMM2-CDG reveals altered neurogenesis and a substrate-accumulation mechanism for N-linked glycosylation deficiency. Mol Biol Cell. Nov;23(21):4175-87. doi: 10.1091/mbc.E12-05-0411. Epub 2012 Sep 5. PMID:22956764 PMCID:PMC3484097

Lee G, Azadi P. (2012) Peptide Mapping and Glycoanalysis of Cancer Cell-Expressed Glycoproteins CA215 Recognized by RP215 Monoclonal Antibody. Journal of Carbohydrate Chemistry. Vol 21, (1) doi: 10.1080/07328303.2011.626544.

Weiss TL, Roth R, Goodson C, Vitha S, Black I, Azadi P, Rusch J, Holzenburg A, Devarenne TP, Goodenough U. (2012) Colony organization in the green alga Botryococcus braunii (Race B) is specified by a complex extracellular matrix. Eukaryot Cell. Dec;11(12):1424-40. doi: 10.1128/EC.00184-12. Epub 2012 Aug 31.PMID:22941913 PMCID:PMC3536293

Burtnick MN, Heiss C, Roberts RA, Schweizer HP, Azadi P, Brett PJ. (2012) Development of capsular polysaccharide-based glycoconjugates for immunization against melioidosis and glanders. Front Cell Infect Microbiol. 2012 Aug 15;2:108. doi: 10.3389/fcimb.2012.00108. eCollection 2012. PMID:22912938 PCMID:PMC3419357

Rillahan CD, Antonopoulos A, Lefort CT, Sonon R, Azadi P, Ley K, Dell A, Haslam SM, Paulson JC. (2012) Global metabolic inhibitors of sialyl- and fucosyltransferases remodel the glycome. Nat Chem Biol.  Jul;8(7):661-8. doi: 10.1038/nchembio.999. Epub 2012 Jun 10. PMID:22683610 PMCID:PMC3427410

Condac E, Strachan H, Gutierrez-Sanchez G, Brainard B, Giese C, Heiss C, Johnson D, Azadi P, Bergmann C, Orlando R, Esmon CT, Harenberg J, Moremen K, Wang L. (2012) The C-terminal fragment of axon guidance molecule Slit3 binds heparin and neutralizes heparin’s anticoagulant activity. Glycobiology.  Sep;22(9):1183-92. doi: 10.1093/glycob/cws087. Epub 2012 May 28.

Valderrama-Rincon JD, Fisher AC, Merritt JH, Fan YY, Reading CA, Chhiba K, Heiss C, Azadi P, Aebi M, DeLisa MP. (2012) An engineered eukaryotic protein glycosylation pathway in Escherichia coli. Nat Chem Biol. Mar 25;8(5):434-6. doi: 10.1038/nchembio.921. PMID:22446837 PMCID:PMC3449280

Pomin VH, Park Y, Huang R, Heiss C, Sharp JS, Azadi P, Prestegard JH. (2012) Exploiting enzyme specificities in digestions of chondroitin sulfates A and C: production of well-defined hexasaccharides. Glycobiology. Jun;22(6):826-38. doi: 10.1093/glycob/cws055. Epub 2012 Feb 17. PMID:22345629 PMCID:PMC3336870

Heiss C, Burtnick MN, Wang Z, Azadi P, Brett PJ. (2012) Structural analysis of capsular polysaccharides expressed by Burkholderia mallei and Burkholderia pseudomallei. Carbohydr Res.  Feb 15;349:90-4. doi: 10.1016/j.carres.2011.12.011. Epub 2011 Dec 23. PMID:22221792

Zhao H, Deneau J, Che GO, Li S, Vagnini F, Azadi P, Sonon R, Ramjit R, Lee SM, Bojanowski K. (2012) Angelica sinensis isolate SBD.4: composition, gene expression profiling, mechanism of action and effect on wounds, in rats and humans. Eur J Dermatol. Jan-Feb;22(1):58-67. doi: 10.1684/ejd.2011.1599. PMID:22146555

Israel B, Garner ST, Thakare M, Elder D. Abney T, Azadi P, Beach JW, Price JC, Ahmed H, Capomacchia AC.  (2012)  Transdermal permeation of novel n-acetyl-glucosamine/NSAIDs mutual prodrugs. Pharm Dev Technol. Jan-Feb;17(1):48-54. 10.3109/10837450.2010.513987. Spub 2010 Sep 21. PMID: 20858066

2011

Gomathinayagam S, Mitchell T, Zartler ER, Heiss C, Azadi P, Zha D, Houston-Cummings NR, Jiang Y, Li F, Giaccone E, Porambo RJ, Anderson CL, Sethuraman N, Li H, Stadheim TA. (2011) Structural elucidation of an α-1,2-mannosidase resistant oligosaccharide produced in Pichia pastoris. Glycobiology. Dec;21(12):1606-15. doi: 10.1093/glycob/cwr082. Epub 2011 Jul 27. PMID:21798867

Bandara AB, Champion AE, Wang X, Berg G, Apicella MA, McLendon M, Azadi P, Snyder DS, Inzana TJ. (2011) Isolation and mutagenesis of a capsule-like complex (CLC) from Francisella tularensis, and contribution of the CLC to F. tularensis virulence in mice. PLoS One.  Apr 22;6(4):e19003. doi: 10.1371/journal.pone.0019003. PMID:21544194 PMCID:PMC3081320

Tagliabracci VS, Heiss C, Karthik C, Contreras CJ, Glushka J, Ishihara M, Azadi P, Hurley TD, DePaoli-Roach AA, Roach PJ. (2011) Phosphate incorporation during glycogen synthesis and Lafora disease. Cell Metab.  Mar 2;13(3):274-82. doi: 10.1016/j.cmet.2011.01.017. PMID:21356517 PMCID:PMC2134772

Pan Y, Wang Z, Yang L, Wang Z, Shi L, Naran R, Azadi P, Xu F. (2011) Differences in cell wall components and allocation of boron to cell walls confer variations in sensitivities of Brassica napus cultivars to boron deficiency. Plant Soil. doi: 10.1007/s11104-011-1074-6.

Heiss C, Wang Z, Azadi P. (2011) Sodium hydroxide permethylation of heparin disaccharides. Rapid Commun Mass Spectrom.  Mar 30;25(6):774-8. doi: 10.1002/rcm.4930. PMID:21337639 PMCID:PMC3928630

Brett PJ, Burtnick MN, Heiss C, Azadi P, DeShazer D, Woods DE, Gherardini FC. (2011),Burkholderia thailandensis oacA mutants facilitate the expression of Burkholderia mallei-like O polysaccharides. Infect Immun. Feb;79(2):961-9. doi: 10.1128/IAI.01023-10. Epub 2010 Nov 29. PMID:21115721

2010

Israel B, Garner ST, Thakare M, Elder D, Abney T, Azadi P, Beach JW, Price JC, Ahmed H, Capomacchia AC. (2012) Transdermal permeation of novel n-acetyl-glucosamine/NSAIDs mutual prodrugs. Pharm Dev Technol.  Jan-Feb;17(1):48-54. doi: 10.3109/10837450.2010.513987. Epub 2010 Sep 21. PMID:20858066

Wada Y, Dell A, Haslam SM, Tissot B, Canis K, Azadi P, Bäckström M, Costello CE, Hansson GC, Hiki Y, Ishihara M, Ito H, Kakehi K, Karlsson N, Hayes CE, Kato K, Kawasaki N, Khoo KH, Kobayashi K, Kolarich D, Kondo A, Lebrilla C, Nakano M, Narimatsu H, Novak J, Novotny MV, Ohno E, Packer NH, Palaima E, Renfrow MB, Tajiri M, Thomsson KA, Yagi H, Yu SY, Taniguchi N. (2010). Comparison of methods for profiling O-glycosylation: Human Proteome Organisation Human Disease Glycomics/Proteome Initiative multi-institutional study of IgA1. Mol Cell Proteomics. Apr;9(4):719-27. doi: 10.1074/mcp.M900450-MCP200. Epub 2009 Dec 28.PMID:20038609 PMCID:PMC2860227

2009

Snyder DS, Brahamsha B, Azadi P, Palenik B. (2009)  Structure of compositionally simple lipopolysaccharide from marine synechococcus. J Bacteriol. Sep;191(17):5499-509. doi:10.1128/JB.00121-09. Epub 2009 Jul 6. PMID:19581366 PMCID:PMC2725629

Naran R, Black S, Decker SR, Azadi P. (2009) Extraction and characterization of native heteroxylans from delignified corn stover and aspen.  Cellulose. 16:661-675. doi:10.1007/s10570-009-9324-y

Zhang J, Heiss C, Thorne PG, Bal Chandralata, Azadi P, Lynd LR. (2009).  Formation of ethyl b-xylopyranoside during simultaneous saccharification and co-fermentation of paper sludge. Enzyme and Microbial Technology. Vol. 44, (4) April, pp 196-202.

Heiss C, Klutts JS, Wang Z, Doering TL, Azadi P. (2009) The structure of Cryptococcus neoformans galactoxylomannan contains beta-D-glucuronic acid. Carbohydr Res.  May 12;344(7):915-20.doi:10.1016/j.carres.2009.03.003. Epub 2009 Mar 10. PMID:19345342 PMCID:PMC2695399

Azadi P, Heiss C. (Mass spectrometry of N-linked glycans.  (2009) Methods Mol Biol. 534:37-51. doi: 10.1007/978-1-59745-022-5_3. Review. PMID:19277537

Lee ST, Mitchell RB, Wang Z, Heiss C, Gardner DR, Azadi P. (2009) Isolation, characterization, and quantification of steroidal saponins in switchgrass (Panicum virgatum L.). J Agric Food Chem.  Mar 25;57(6):2599-604. doi: 10.1021/jf803907y. PMID:19243100

Li Y, Cao C, Jia W, Yu L, Mo M, Wang Q, Huang Y, Lim JM, Ishihara M, Wells L, Azadi P, Robinson H, He YW, Zhang L, Mariuzza RA. (2009) Structure of the F-spondin domain of mindin, an integrin ligand and pattern recognition molecule. EMBO J. 2009 Feb 4;28(3):286-97. doi: 10.1038/emboj.2008.288. Epub 2009 Jan 15. PMID:19153605 PMCID:PMC2637340

Chill L, Trinh L, Azadi P, Ishihara M, Sonon R, Karnaukhova E, Ophir Y, Golding B, Shiloach J. (2009) Production, purification, and characterization of human alpha1 proteinase inhibitor from Aspergillus niger. Biotechnol Bioeng. 2009 Feb 15;102(3):828-44. doi: 10.1002/bit.22099. PMID:18828177

2008

Macnaughtan MA, Tian F, Liu S, Meng L, Park S, Azadi P, Moremen KW, Prestegard JH. (2008), 13C-sialic acid labeling of glycans on glycoproteins using ST6Gal-I. J Am Chem Soc.  Sep 10;130(36):11864-5. doi: 10.1021/ja804614w. Epub 2008 Aug 14. PMID:18700760 PMCID:PMC2640832

2007

Li J, Ryder C, Mandal M, Ahmed F, Azadi P, Snyder DS, Pechous RD, Zahrt T, Inzana TJ. (2007), Attenuation and protective efficacy of an O-antigen-deficient mutant of Francisella tularensis LVS. Microbiology. Sep;153(Pt 9):3141-53. PMID:17768257

Garner ST Jr, Israel BJ, Achmed H, Capomacchia AC, Abney T, Azadi P. (2007), Transdermal permeability of N-acetyl-D-glucosamine. Pharm Dev Technol. 2007;12(2):169-74. PMID:17510888

Alvarez-Manilla G, Warren NL, Abney T, Atwood J 3rd, Azadi P, York WS, Pierce M, Orlando R. (2007), Tools for glycomics: relative quantitation of glycans by isotopic permethylation using 13CH3I. Glycobiology.  Jul;17(7):677-87. Epub 2007 Mar 23. PMID:17384119

Wada Y, Azadi P, Costello CE, Dell A, Dwek RA, Geyer H, Geyer R, Kakehi K, Karlsson NG, Kato K, Kawasaki N, Khoo KH, Kim S, Kondo A, Lattova E, Mechref Y, Miyoshi E, Nakamura K, Narimatsu H, Novotny MV, Packer NH, Perreault H, Peter-Katalinic J, Pohlentz G, Reinhold VN, Rudd PM, Suzuki A, Taniguchi N. (2007) Comparison of the methods for profiling glycoprotein glycans–HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study. Glycobiology. Apr;17(4):411-22. Epub 2007 Jan 12. Erratum in: Glycobiology. 2007 May;17(5):10G. PMID:17223647

Brett PJ, Burtnick MN, Snyder DS, Shannon JG, Azadi P, Gherardini FC. (2007) Burkholderia mallei expresses a unique lipopolysaccharide mixture that is a potent activator of human Toll-like receptor 4 complexes. Mol Microbiol. Jan;63(2):379-90. Epub 2006 Dec 5. PMID:17163980 PMCID:PMC1974782

2006

Schietinger A, Philip M, Yoshida BA, Azadi P, Liu H. Meredit SC, Schreiber H. (2006) A mutant chaperone converts a wild-type protein into a tumor-specific antigen. Science. Oct 13:314(5797: 304-8. PMID: 17038624

Zhang P, Snyder S, Feng P, Azadi P, Zhang S, Bulgheresi S, Sanderson KE, He J, Klena J, Chen T. (2006) Role of N-acetylglucosamine within core lipopolysaccharide of several species of gram-negative bacteria in targeting the DC-SIGN (CD209). J Immunol. Sep 15;177(6):4002-11. PMID:16951363

Gibson DL, White AP, Snyder SD, Martin S, Heiss C, Azadi P, Surette M, Kay WW. (2006) Salmonella produces an O-antigen capsule regulated by AgfD and important for environmental persistence. J Bacteriol.  Nov;188(22):7722-30. PMID:17079680, PMCID: PMC1636306 PMCID:PMC1636306

Snyder DS, Gibson D, Heiss C, Kay W, Azadi P. (2006) Structure of a capsular polysaccharide isolated from Salmonella enteritidis. Carbohydr Res.  Oct 16;341(14):2388-97. Epub 2006 Jul 20. PMID:16857179

2004

Laus MC, Logman TJ, Van Brussel AA, Carlson RW, Azadi P, Gao MY, Kijne JW. (2004), Involvement of exo5 in production of surface polysaccharides in Rhizobium leguminosarum and its role in nodulation of Vicia sativa subsp. nigra. J Bacteriol.  Oct;186(19):6617-25. PMID:15375143 PMCID:PMC516619

Kamar M, Alvarez-Manilla G, Abney T, Azadi P, Kumar Kolli VS, Orlando R, Pierce M. (2004), Analysis of the site-specific N-glycosylation of beta1,6 N-acetylglucosaminyltransferase V. Glycobiology. 2004 Jul;14(7):583-92. Epub 2004 Apr 14. PMID:15084511

Jahfar M. Azadi P. (2004) Glycosyl compostion of polysaccharide from Tinospora cordifolia, II, Glycosyl linkages. Pharm. Mar:54(1):73-8. PMID:15050047

2003

Wozniak DJ, Wyckoff TJ, Starkey M, Keyser R, Azadi P, O’Toole GA, Parsek MR. (2003) , Alginate is not a significant component of the extracellular polysaccharide matrix of PA14 and PAO1 Pseudomonas aeruginosa biofilms. Proc Natl Acad Sci U S A. 2003 Jun 24;100(13):7907-12. Epub 2003 Jun 16. PMID:12810959 PMCID:PMC164686

Lawrence ML, Banes MM, Azadi P, Reeks BY. (2003) The Edwardsiella ictaluri O polysaccharide biosynthesis gene cluster and the role of O polysaccharide in resistance to normal catfish serum and catfish neutrophils. Microbiology.  Jun;149(Pt 6):1409-21. PMID:12777482

2002

Marsh ME, Ridall AL, Azadi P, Duke PJ. (2002) Galacturonomannan and Golfi-derived membrane linked to growth and shaping of biogenic calcite. J Struct Biol. Jul:139(1):39-45. PMID:12372318

2001

Sangadala S, Azadi P, Carlson R, Adang MJ. (2001) Carbohydrate analyses of Manduca sexta aminopeptidase N. co-purifying neutral lipids and their functional interactions with Bacillus thuringiensis Cry1Ac toxin. Insect Biochem Mol Biol. Dec:32(1):97-107. PMID:11719073

2000

Liab K, Azadi P, Collins R, Tolan J, Kim jS, Eriksson KL. (2000) Relationships between activities of xylanses and xylan structures. Enzyme Microb Technol. Jul1;27(1-2):89-94. PMID: 10862906

1998

Ohana P, Delmer DP, Carlson RW, Glushka J, Azadi P, Benziman M. (1998) Identification of a novel triterpenoid saponin from Pisum sativum as a specific inhibitor of the diguanylate cyclase of Acetobacter xylinum. Plant Cell Physiol. 39(2): 144-152.

1996

Khoo KH, Douglas E, Azadi P, Inamine JM, Besra GS, Milusova K, Brennan PJ, Chatterjee D. (1996) Truncated Structural Variants of Lipoarabinomannan in Ethambutol Drug-resistant Strains of Mycobacterium smegmatis: Inhibition of Arabinan Biosynthesis by Ethambutol. J. Biol. Chem. 271:28682-28690.

1995

Azadi P, O’Neill MA, Bergmann C, Darvill AG, Albersheim P. (1995) The backbone of the pectic polysaccharide rhamnogalacturonan I is cleaved by an andohydrolase and an endolyase. Glycobiology.  Dec;5(8):783-9. PMID:8720076.

1993

Siciliano RA, Morris HR, McDowell RA, Azadi P, Rogers ME, Bennett HPJ, Dell A. (1993) The Lewis x ipitope is a major non-reducing structure in the sulphated N-glycans attached to Asn-65 of bovine pro-opiomelanocortin. Glycobiology.  3(3):225-239. doi:10.1093/glycob/3.3225

Sambasivam H, Rassouli M, Murray RK, Nagpurkar A, Mookerjea S, Azadi P, Dell A, Morros HR. (1993) Studies on the Carbohydrate Moiety and on the Biosynthesis of Rat C-reactive Protein. The Journal of Biological Chemistry. Vol. 268, No. 14, Issue of May 15, pp 1007-10016.

1992

Rassouli M. Sambasivam H. Azadi P, Dell A, Morris HR, Nagpurkar A. Mookerjea S. Murray RK.  (1992) Derivation of the amino acid sequence of rat C-reactive protein from cDNA cloning with additional studies on the nature of its dimeric component.  J. Biol Chem. Feb 15;267(5):2947-54. PMID:1737750

Linget C, Collinson SK, Azadi P, Dell A, Page WJ, Abdallah MA.  (1992) Structure of Azoverdin, a Pyoverdin-like Siderophore of Azomonas macrocytogenes ATCC 12334.  Tetrahedron Letters. Vol 33, No. 14, pp 1889-1892. Printed in Great Britain.

1990

Dell A, Azadi P, Tiller P, Thomas-Oates J, Jennings HJ, Beurret M, Francis M. (1990) Analysis of oligosaccharide epitopes of meningococcal lipopolysaccharides by fast-atom-bombardment mass spectrometry. Carbohydrate Research. 200 59-76.

Manzi AE, Dell A, Azadi P, Varki A (1990) Studies of naturally occurring modification of sialic acids by fast atom bombardment mass spectrometry: Analysis of positional isomers by periodate cleavage.  J. Biol. Chem. 265: 8094-8107.  PMID: 2159468