Publications

2022

Montoya NR, Porsch EA, Muñoz VL, Muszyński A, Vlach J, Hahn DK, Azadi P, Sherman M, Yang H, Chandler CE, Ernst RK, St Geme JW 3rd. Surface Anchoring of the Kingella kingae Galactan Is Dependent on the Lipopolysaccharide O-Antigen. mBio. 2022 Oct 26; 13(5):e0229522. doi: 10.1128/mbio.02295-22. Epub 2022 Sep 7. PubMed PMID: 36069736; PubMed Central PMCID: PMC9615999. May 18 (5):e1010488. doi: 10.1371/journal.ppat.1010488. eCollection 2022 May. PubMed PMID: 35503780; PubMed Central PMCID: PMC9106183

Sosicka P, Ng BG, Pepi LE, Shajahan A, Wong M, Scott DA, Matsumoto K, Xia ZJ, Lebrilla CB, Haltiwanger RS, Azadi P, Freeze HH. Origin of cytoplasmic GDP-fucose determines its contribution to glycosylation reactions. J Cell Biol. 2022 Oct 3; 221(10). doi: 10.1083/jcb.202205038. Epub 2022 Sep 2. PubMed PMID: 36053214; PubMed Central PMCID: PMC9441714.

Spellmon N, Muszyński A, Górniak I, Vlach J, Hahn D, Azadi P, Zimmer J. Molecular basis for polysaccharide recognition and modulated ATP hydrolysis by the O antigen ABC transporter. Nat Commun. 2022 Sep 5; 13(1):5226. doi: 10.1038/s41467-022-32597-2. PubMed PMID: 36064941 ; PubMed Central PMCID: PMC9445017.

Barnard DL, Belnap DM, Azadi P, Heiss C, Snyder DS, Bock SC, Konowalchuk TW. Examining the interactions of Galahad™ compound with viruses to develop a novel inactivated influenza A virus vaccine. Heliyon. 2022 Jul; 8(7):e09887. doi: 10.1016/j.heliyon.2022.e09887. Epub 2022 Jul 6. PubMed PMID: 35821966 ; PubMed Central PMCID: PMC9258431.

Cao X, Wang S, Gadi MR, Liu D, Wang PG, Wan XF, Zhang J, Chen X, Pepi LE, Azadi P, Li L. Systematic synthesis of bisected N-glycans and unique recognitions by glycan-binding proteins. Chem Sci. 2022 Jun 29; 13(25):7644-7656. doi: 10.1039/d1sc05435j.eCollection 2022 Jun 29. PubMed PMID: 35872821 ; PubMed Central PMCID: PMC9241959.

Yang Y, Xu B, Haverstick J, Ibtehaz N, Muszyński A, Chen X, Chowdhury MEH, Zughaier SM, Zhao Y. Differentiation and classification of bacterial endotoxins based on surface enhanced Raman scattering and advanced machine learning. Nanoscale. 2022 Jun 23; 14(24):8806-8817. doi: 10.1039/d2nr01277d. PubMed PMID: 35686584 ; PubMed Central PMCID: PMC9575096.

Erickson JJ, Archer-Hartmann S, Yarawsky AE, Miller JLC, Seveau S, Shao TY, Severance AL, Miller-Handley H, Wu Y, Pham G, Wasik BR, Parrish CR, Hu YC, Lau JTY, Azadi P, Herr AB, Way SS. Pregnancy enables antibody protection against intracellular infection. Nature. 2022 Jun; 606(7915):769-775. doi: 10.1038/s41586-022-04816-9.Epub 2022 Jun 8. PubMed PMID: 35676476 ; PubMed Central PMCID: PMC9233044.

Maceda-López LF, Góngora-Castillo EB, Ibarra-Laclette E, Morán-Velázquez DC, Girón Ramírez A, Bourdon M, Villalpando-Aguilar JL, Toomer G, Tang JZ, Azadi P, Santamaría JM, López-Rosas I, López MG, Simpson J, Alatorre-Cobos F. Transcriptome Mining Provides Insights into Cell Wall Metabolism and Fiber Lignification in Agave tequilana Weber. Plants (Basel). 2022 Jun 2; 11(11). doi: 10.3390/plants11111496. PubMed PMID: 35684270 ; PubMed Central PMCID: PMC9182668.

García-Hernández E, Loera-Quezada MM, Morán-Velázquez DC, López MG, Chable-Vega MA, Santillán-Fernández A, Zavaleta-Mancera HA, Tang JZ, Azadi P, Ibarra-Laclette E, Alatorre-Cobos F. Indirect organogenesis for high frequency shoot regeneration of two cultivars of Sansevieria trifasciata Prain differing in fiber production. Sci Rep. 2022 May 20; 12(1):8507. doi: 10.1038/s41598-022-12640-4. PubMed PMID: 35596065 ; PubMed Central PMCID: PMC9122912.

Liu X, Onda M, Watson N, Hassan R, Ho M, Bera TK, Wei J, Chakraborty A, Beers R, Zhou Q, Shajahan A, Azadi P, Zhan J, Xia D, Pastan I. Highly active CAR T cells that bind to a juxtamembrane region of mesothelin and are not blocked by shed mesothelin. Proc Natl Acad Sci U S A. 2022 May 10; 119(19):e2202439119. doi: 10.1073/pnas.2202439119.Epub 2022 May 5. PubMed PMID: 35512094 ; PubMed Central PMCID: PMC9171807.

Ilani T, Reznik N, Yeshaya N, Feldman T, Vilela P, Lansky Z, Javitt G, Shemesh M, Brenner O, Elkis Y, Varsano N, Murray N, Azadi P, Jaramillo AM, Evans CM, Fass D. The Colon Mucosal Sialylglycome Is Redox-Regulated by the Golgi Enzyme QSOX1. bioRxiv. 2022 May; :490496 [Preprint]. doi: https://doi.org/10.1101/2022.05.03.490496.

Welbourn S, Chakraborty S, Yang JE, Gleinich AS, Gangadhara S, Khan S, Ferrebee C, Yagnik B, Burton S, Charles T, Smith SA, Williams D, Mopuri R, Upadhyay AA, Thompson J, Price MA, Wang S, Qin Z, Shen X, Williams LD, Eisel N, Peters T, Zhang L, Kilembe W, Karita E, Tomaras GD, Bosinger SE, Amara RR, Azadi P, Wright ER, Gnanakaran S, Derdeyn CA. A neutralizing antibody target in early HIV-1 infection was recapitulated in rhesus macaques immunized with the transmitted/founder envelope sequence. PLoS Pathog. 2022 May; 18(5):e1010488. doi: 10.1371/journal.ppat.1010488.eCollection 2022 May. PubMed PMID: 35503780 ; PubMed Central PMCID: PMC9106183.

Patel PK, Tung SK, Porfirio S, Sonon R, Azadi P, Free SJ. Extracellular targeting of Neurospora crassa cell wall and secreted glycoproteins by DFG-5. Fungal Genet Biol. 2022 May; 160:103686. doi: 10.1016/j.fgb.2022.103686.Epub 2022 Mar 17. PubMed PMID: 35306147 ; PubMed Central PMCID: PMC9307126.

Kołaczkowski BM, Jørgensen CI, Spodsberg N, Stringer MA, Supekar NT, Azadi P, Westh P, Krogh KBRM, Jensen K. Analysis of fungal high-mannose structures using CAZymes. Glycobiology. 2022 Mar 31; 32(4):304-313. doi: 10.1093/glycob/cwab127. PubMed PMID: 34939126 ; PubMed Central PMCID: PMC8970417.

Xiao W, Pinilla-Baquero A, Faulkner J, Song X, Prabhakar P, Qiu H, Moremen KW, Ludwig A, Dempsey PJ, Azadi P, Wang L. Robo4 is constitutively shed by ADAMs from endothelial cells and the shed Robo4 functions to inhibit Slit3-induced angiogenesis. Sci Rep. 2022 Mar 14; 12(1):4352. doi: 10.1038/s41598-022-08227-8. PubMed PMID: 35288626 ; PubMed Central PMCID: PMC8921330.

Jain M, Cai L, Black I, Azadi P, Carlson RW, Jones KM, Gabriel DW. ‘Candidatus Liberibacter asiaticus’-Encoded BCP Peroxiredoxin Suppresses Lipopolysaccharide-Mediated Defense Signaling and Nitrosative Stress In Planta. Mol Plant Microbe Interact. 2022 Mar; 35(3):257-273. doi: 10.1094/MPMI-09-21-0230-R.Epub 2022 Mar 10. PubMed PMID: 34931906.

Biswal AK, Hengge NN, Black IM, Atmodjo MA, Mohanty SS, Ryno D, Himmel ME, Azadi P, Bomble YJ, Mohnen D. Composition and yield of non-cellulosic and cellulosic sugars in soluble and particulate fractions during consolidated bioprocessing of poplar biomass by Clostridium thermocellum. Biotechnol Biofuels Bioprod. 2022 Feb 28; 15(1):23. doi: 10.1186/s13068-022-02119-9. PubMed PMID: 35227303 ; PubMed Central PMCID: PMC8887089.

Young ID, Nepogodiev SA, Black IM, Le Gall G, Wittmann A, Latousakis D, Visnapuu T, Azadi P, Field RA, Juge N, Kawasaki N. Lipopolysaccharide associated with β-2,6 fructan mediates TLR4-dependent immunomodulatory activity in vitro. Carbohydr Polym. 2022 Feb 1; 277:118606. doi: 10.1016/j.carbpol.2021.118606.Epub 2021 Aug 26. PubMed PMID: 34893207.

Wu H, Shajahan A, Yang JY, Capota E, Wands AM, Arthur CM, Stowell SR, Moremen KW, Azadi P, Kohler JJ. A photo-cross-linking GlcNAc analog enables covalent capture of N-linked glycoprotein-binding partners on the cell surface. Cell Chem Biol. 2022 Jan 20; 29(1):84-97.e8. doi: 10.1016/j.chembiol.2021.07.007.Epub 2021 Jul 30. PubMed PMID: 34331854 ; PubMed Central PMCID: PMC8792112.

Voos KM, Cao W, Arce NA, Legan ER, Wang Y, Shajahan A, Azadi P, Lollar P, Zhang XF, Li R. Desialylation of O-glycans activates von Willebrand factor by destabilizing its autoinhibitory module. J Thromb Haemost. 2022 Jan; 20(1):196-207. doi: 10.1111/jth.15528.Epub 2021 Sep 26. PubMed PMID: 34529349 ; PubMed Central PMCID: PMC9134874.

2021

Shajahan A, Pepi LE, Rouhani DS, Heiss C, Azadi P. Glycosylation of SARS-CoV-2: structural and functional insights. Anal Bioanal Chem. 2021 Dec; 413 (29) :7179-7193. doi: 10.1007/s00216-021-03499-x. Epub 2021 Jul 7. Review. PubMed PMID: 34235568; PubMed Central PMCID: PMC8262766.

Wang T, Wang Z, de Fabritus L, Tao J, Saied EM, Lee HJ, Ramazanov BR, Jackson B, Burkhardt D, Parker M, Gleinich AS, Wang Z, Seo DE, Zhou T, Xu S, Alecu I, Azadi P, Arenz C, Hornemann T, Krishnaswamy S, van de Pavert SA, Kaech SM, Ivanova NB, Santori FR. 1-deoxysphingolipids bind to COUP-TF to modulate lymphatic and cardiac cell development. Dev Cell. 2021 Nov 22; 56 (22) :3128-3145.e15. doi: 10.1016/j.devcel.2021.10.018. Epub 2021 Nov 10. PubMed PMID: 34762852; PubMed Central PMCID: PMC8628544.

Nothaft H, Bian X, Shajahan A, Miller WG, Bolick DT, Guerrant RL, Azadi P, Ng KKS, Szymanski CM. Detecting Glucose Fluctuations in the Campylobacter jejuni N-Glycan Structure. ACS Chem Biol. 2021 Nov 19; 16 (11) :2690-2701. doi: 10.1021/acschembio.1c00498. Epub 2021 Nov 2. PubMed PMID: 34726367; PubMed Central PMCID: PMC9307124.

Supekar NT, Shajahan A, Gleinich AS, Rouhani DS, Heiss C, Chapla DG, Moremen KW, Azadi P. Variable posttranslational modifications of severe acute respiratory syndrome coronavirus 2 nucleocapsid protein. Glycobiology. 2021 Sep 20; 31 (9) :1080-1092. doi: 10.1093/glycob/cwab044. PubMed PMID: 33997890; PubMed Central PMCID: PMC8241430.

Kondo Y, Larabee JL, Gao L, Shi H, Shao B, Hoover CM, McDaniel JM, Ho YC, Silasi-Mansat R, Archer-Hartmann SA, Azadi P, Srinivasan RS, Rezaie AR, Borczuk A, Laurence JC, Lupu F, Ahamed J, McEver RP, Papin JF, Yu Z, Xia L. L-SIGN is a receptor on liver sinusoidal endothelial cells for SARS-CoV-2 virus. JCI Insight. 2021 Jul 22; 6 (14). doi: 10.1172/jci.insight.148999. PubMed PMID: 34291736; PubMed Central PMCID: PMC8410055.

Barnes WJ, Koj S, Black IM, Archer-Hartmann SA, Azadi P, Urbanowicz BR, Peña MJ, O’Neill MA. Protocols for isolating and characterizing polysaccharides from plant cell walls: a case study using rhamnogalacturonan-II. Biotechnol Biofuels. 2021 Jun 22; 14 (1) :142. doi: 10.1186/s13068-021-01992-0. PubMed PMID: 34158109; PubMed Central PMCID: PMC8218411.

Gleinich AS. Vaccines and Therapeutics for COVID-19 – How Can Understanding SARS-CoV-2 Glycosylation Lead to Pharmaceutical Advances?. American Pharmaceutical Review. 2021 June.

Yue J, Jin W, Yang H, Faulkner J, Song X, Qiu H, Teng M, Azadi P, Zhang F, Linhardt RJ, Wang L. Heparan Sulfate Facilitates Spike Protein-Mediated SARS-CoV-2 Host Cell Invasion and Contributes to Increased Infection of SARS-CoV-2 G614 Mutant and in Lung Cancer. Front Mol Biosci. 2021; 8 :649575. doi: 10.3389/fmolb.2021.649575. eCollection 2021. PubMed PMID: 34179075; PubMed Central PMCID: PMC8231436.

Casasnovas J, Damron CL, Jarrell J, Orr KS, Bone RN, Archer-Hartmann S, Azadi P, Kua KL. Offspring of Obese Dams Exhibit Sex-Differences in Pancreatic Heparan Sulfate Glycosaminoglycans and Islet Insulin Secretion. Front Endocrinol (Lausanne). 2021; 12 :658439. doi: 10.3389/fendo.2021.658439. eCollection 2021. PubMed PMID: 34108935; PubMed Central PMCID: PMC8181410.

Shajahan A, Archer-Hartmann S, Supekar NT, Gleinich AS, Heiss C, Azadi P. Comprehensive characterization of N- and O- glycosylation of SARS-CoV-2 human receptor angiotensin converting enzyme 2. Glycobiology. 2021 May 3; 31 (4) :410-424. doi: 10.1093/glycob/cwaa101. PubMed PMID: 33135055; PubMed Central PMCID: PMC7665489.

Sun X, Wu Q, Picha DH, Ferguson MH, Ndukwe IE, Azadi P. Comparative performance of bio-based coatings formulated with cellulose, chitin, and chitosan nanomaterials suitable for fruit preservation. Carbohydr Polym. 2021 May 1; 259 :117764. doi: 10.1016/j.carbpol.2021.117764. Epub 2021 Feb 10. PubMed PMID: 33674020.

Heiss C, Black I, Ishihara M, Tatli M, Devarenne TP, Azadi P. Structure of the polysaccharide sheath from the B race of the green microalga Botryococcus braunii. Algal research. 2021 May.

Mathur B, Shajahan A, Arif W, Chen Q, Hand NJ, Abramowitz LK, Schoonjans K, Rader DJ, Kalsotra A, Hanover JA, Azadi P, Anakk S. Nuclear receptors FXR and SHP regulate protein N-glycan modifications in the liver. Sci Adv. 2021 Apr; 7 (17). doi: 10.1126/sciadv.abf4865. Print 2021 Apr. PubMed PMID: 33883138; PubMed Central PMCID: PMC8059921.

Zeb M, Tackaberry LE, Massicotte HB, Egger KN, Reimer K, Lu G, Heiss C, Azadi P, Lee CH. Structural elucidation and immuno-stimulatory activity of a novel polysaccharide containing glucuronic acid from the fungus Echinodontium tinctorium. Carbohydr Polym. 2021 Apr 15; 258 :117700. doi: 10.1016/j.carbpol.2021.117700. Epub 2021 Jan 27. PubMed PMID: 33593571.

Muszyński A, Zarember KA, Heiss C, Shiloach J, Berg LJ, Audley J, Kozyr A, Greenberg DE, Holland SM, Malech HL, Azadi P, Carlson RW, Gallin JI.Granulibacter bethesdensis, a Pathogen from Patients with Chronic Granulomatous Disease, Produces a Penta-Acylated Hypostimulatory Glycero-D-talo-oct-2-ulosonic Acid-Lipid A Glycolipid (Ko-Lipid A). Int J Mol Sci. 2021 Mar 24; 22 (7). doi: 10.3390/ijms22073303. PubMed PMID: 33804872; PubMed Central PMCID: PMC8036547.

Dos Santos Dias L, Dobson HE, Bakke BK, Kujoth GC, Huang J, Kohn EM, Taira CL, Wang H, Supekar NT, Fites JS, Gates D, Gomez CL, Specht CA, Levitz SM, Azadi P, Li L, Suresh M, Klein BS, Wüthrich M. Structural basis of Blastomyces Endoglucanase-2 adjuvancy in anti-fungal and -viral immunity. PLoS Pathog. 2021 Mar; 17 (3) :e1009324. doi: 10.1371/journal.ppat.1009324. eCollection 2021 Mar. PubMed PMID: 33735218; PubMed Central PMCID: PMC8009368.

Latchoumane CV, Betancur MI, Simchick GA, Sun MK, Forghani R, Lenear CE, Ahmed A, Mohankumar R, Balaji N, Mason HD, Archer-Hartmann SA, Azadi P, Holmes PV, Zhao Q, Bellamkonda RV, Karumbaiah L. Engineered glycomaterial implants orchestrate large-scale functional repair of brain tissue chronically after severe traumatic brain injury. Sci Adv. 2021 Mar; 7 (10). doi: 10.1126/sciadv.abe0207. Print 2021 Mar. PubMed PMID: 33674306; PubMed Central PMCID: PMC7935369.

Ma X, Li Y, Kondo Y, Shi H, Han J, Jiang Y, Bai X, Archer-Hartmann SA, Azadi P, Ruan C, Fu J, Xia L. Slc35a1 deficiency causes thrombocytopenia due to impaired megakaryocytopoiesis and excessive platelet clearance in the liver. Haematologica. 2021 Mar 1; 106 (3) :759-769. doi: 10.3324/haematol.2019.225987. PubMed PMID: 32303557; PubMed Central PMCID: PMC7927894.

Wang M, Shajahan A, Pepi LE, Azadi P, Zaia J. Glycoproteomic Sample Processing, LC-MS, and Data Analysis Using GlycReSoft. Curr Protoc. 2021 Mar; 1 (3) :e84. doi: 10.1002/cpz1.84. PubMed PMID: 33761173; PubMed Central PMCID: PMC8349174.

Soto MJ, Prabhakar PK, Wang HT, Backe J, Chapla D, Bartetzko M, Black IM, Azadi P, Peña MJ, Pfrengle F, Moremen KW, Urbanowicz BR, Hahn MG. AtFUT4 and AtFUT6 Are Arabinofuranose-Specific Fucosyltransferases. Front Plant Sci. 2021; 12 :589518. doi: 10.3389/fpls.2021.589518. eCollection 2021. PubMed PMID: 33633757; PubMed Central PMCID: PMC7900004.

Talabnin K, Talabnin C, Khiaowichit J, Sutatum N, Asavaritikrai P, Suksaweang S, Tongtawee T, Ishihara M, Azadi P, Sripa B. High expression of tissue O-linked glycans is associated with a malignant phenotype of cholangiocarcinoma. J Int Med Res. 2021 Feb; 49 (2) :300060520976864. doi: 10.1177/0300060520976864. PubMed PMID: 33535865; PubMed Central PMCID: PMC7869157.

 

2020

Bogacz M, El Abbar FM, Cox CA, Li J, Fiedler JS, Tran LKH, Tran PMH, Daugherty CL, Blake KH, Wang Z, Azadi P, Thompson SA. Binding of Campylobacter jejuni FliW Adjacent to the CsrA RNA-Binding Pockets Modulates CsrA Regulatory Activity. Front Microbiol. 2020;11:531596. doi: 10.3389/fmicb.2020.531596. eCollection 2020. PubMed PMID: 33505360; PubMed Central PMCID: PMC7829508.

Natarajan A, Jaroentomeechai T, Cabrera-Sánchez M, Mohammed JC, Cox EC, Young O, Shajahan A, Vilkhovoy M, Vadhin S, Varner JD, Azadi P, DeLisa MP.Engineering orthogonal human O-linked glycoprotein biosynthesis in bacteria. Nat Chem Biol. 2020 Oct; 16 (10) :1062-1070. doi: 10.1038/s41589-020-0595-9. Epub 2020 Jul 27. PubMed PMID: 32719555; PubMed Central PMCID: PMC7857696.

Porfirio S, Archer-Hartmann S, Moreau GB, Ramakrishnan G, Haque R, Kirkpatrick BD, Petri WA, Azadi P. New strategies for profiling and characterization of human milk oligosaccharides. Glycobiology. 2020 Sep 28; 30 (10) :774-786. doi: 10.1093/glycob/cwaa028. PubMed PMID: 32248230; PubMed Central PMCID: PMC7526734.

Justen AM, Hodges HL, Kim LM, Sadecki PW, Porfirio S, Ultee E, Black I, Chung GS, Briegel A, Azadi P, Kiessling LL. Polysaccharide length affects mycobacterial cell shape and antibiotic susceptibility. Sci Adv. 2020 Sep; 6 (38). doi: 10.1126/sciadv.aba4015. Print 2020 Sep. PubMed PMID: 32938674; PubMed Central PMCID: PMC7494350.

Kittur FS, Hung CY, Zhu C, Shajahan A, Azadi P, Thomas MD, Pearce JL, Gruber C, Kallolimath S, Xie J. Glycoengineering tobacco plants to stably express recombinant human erythropoietin with different N-glycan profiles. Int J Biol Macromol. 2020 Aug 15; 157 :158-169. doi: 10.1016/j.ijbiomac.2020.04.199. Epub 2020 Apr 26. PubMed PMID: 32348856; PubMed Central PMCID: PMC8349175.

Shajahan A, Supekar NT, Chapla D, Heiss C, Moremen KW, Azadi P. Simplifying Glycan Profiling through a High-Throughput Micropermethylation Strategy. SLAS Technol. 2020 Aug; 25 (4) :367-379. doi: 10.1177/2472630320912929. Epub 2020 May 4. PubMed PMID: 32364434; PubMed Central PMCID: PMC7931992.

Heiss C, Azadi P. Carbohydrate Structure Analysis: Methods and Applications. SLAS Technol. 2020 Aug; 25 (4) :305-306. doi: 10.1177/2472630320937003. PubMed PMID: 32689910.

Wong JEMM, Gysel K, Birkefeldt TG, Vinther M, Muszyński A, Azadi P, Laursen NS, Sullivan JT, Ronson CW, Stougaard J, Andersen KR. Structural signatures in EPR3 define a unique class of plant carbohydrate receptors. Nat Commun. 2020 Jul 30; 11 (1) :3797. doi: 10.1038/s41467-020-17568-9. PubMed PMID: 32732998; PubMed Central PMCID: PMC7392887.

Wenzel CQ, Mills DC, Dobruchowska JM, Vlach J, Nothaft H, Nation P, Azadi P, Melville SB, Carlson RW, Feldman MF, Szymanski CM. An atypical lipoteichoic acid from Clostridium perfringens elicits a broadly cross-reactive and protective immune response. J Biol Chem. 2020 Jul 10; 295 (28) :9513-9530. doi: 10.1074/jbc.RA119.009978. Epub 2020 May 18. PubMed PMID: 32424044; PubMed Central PMCID: PMC7363129.

Ndukwe IE, Wang X, Lam NYS, Ermanis K, Alexander KL, Bertin MJ, Martin GE, Muir G, Paterson I, Britton R, Goodman JM, Helfrich EJN, Piel J, Gerwick WH, Williamson RT. Synergism of anisotropic and computational NMR methods reveals the likely configuration of phormidolide A. Chem Commun (Camb). 2020 Jul 9; 56 (55) :7565-7568. doi: 10.1039/d0cc03055d. PubMed PMID: 32520016; PubMed Central PMCID: PMC7436192.

Lunin VV, Wang HT, Bharadwaj VS, Alahuhta M, Peña MJ, Yang JY, Archer-Hartmann SA, Azadi P, Himmel ME, Moremen KW, York WS, Bomble YJ, Urbanowicz BR. Molecular Mechanism of Polysaccharide Acetylation by the Arabidopsis Xylan O-acetyltransferase XOAT1. Plant Cell. 2020 Jul; 32 (7) :2367-2382. doi: 10.1105/tpc.20.00028. Epub 2020 Apr 30. PubMed PMID: 32354790; PubMed Central PMCID: PMC7346548.

Talabnin K, Talabnin C, Kumagai T, Sutatum N, Khiaowichit J, Dechsukhum C, Ishihara M, Azadi P, Sripa B. Ganglioside GM2: a potential biomarker for cholangiocarcinoma. J Int Med Res. 2020 Jul; 48 (7) :300060520903216. doi: 10.1177/0300060520903216. PubMed PMID: 32692591; PubMed Central PMCID: PMC7375732.

Ticar BF, Rohmah Z, Neri TAN, Pahila IG, Vasconcelos A, Archer-Hartmann SA, Reiter CEN, Dobruchowska JM, Choi BD, Heiss C, Azadi P, Pomin VH.Biocompatibility and structural characterization of glycosaminoglycans isolated from heads of silver-banded whiting (Sillago argentifasciata Martin & Montalban 1935). Int J Biol Macromol. 2020 May 15; 151 :663-676. doi: 10.1016/j.ijbiomac.2020.02.160. Epub 2020 Feb 16. PubMed PMID: 32070739.

Shajahan A, Supekar NT, Heiss C, Azadi P. Exploring the scope of high throughput micro‐permethylation based glycomics. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2020 April; 34 (S1):1-1.

Sacher JC, Shajahan A, Butcher J, Patry RT, Flint A, Hendrixson DR, Stintzi A, Azadi P, Szymanski CM. Binding of Phage-Encoded FlaGrab to Motile Campylobacter jejuni Flagella Inhibits Growth, Downregulates Energy Metabolism, and Requires Specific Flagellar Glycans. Front Microbiol. 2020; 11 :397. doi: 10.3389/fmicb.2020.00397. eCollection 2020. PubMed PMID: 32265863; PubMed Central PMCID: PMC7099621.

van Wolferen M, Shajahan A, Heinrich K, Brenzinger S, Black IM, Wagner A, Briegel A, Azadi P, Albers SV. Species-Specific Recognition of SulfolobalesMediated by UV-Inducible Pili and S-Layer Glycosylation Patterns. mBio. 2020 Mar 10; 11 (2). doi: 10.1128/mBio.03014-19. PubMed PMID: 32156822; PubMed Central PMCID: PMC7064770.

Park Y, Kim D, Boorgula GD, De Schutter K, Smagghe G, Šimo L, Archer-Hartmann SA, Azadi P. Alpha-Gal and Cross-Reactive Carbohydrate Determinants in the N-Glycans of Salivary Glands in the Lone Star Tick, Amblyomma americanum. Vaccines (Basel). 2020 Jan 9; 8 (1). doi: 10.3390/vaccines8010018. PubMed PMID: 31936588; PubMed Central PMCID: PMC7157712.

Garber JM, Nothaft H, Pluvinage B, Stahl M, Bian X, Porfirio S, Enriquez A, Butcher J, Huang H, Glushka J, Line E, Gerlt JA, Azadi P, Stintzi A, Boraston AB, Szymanski CM. The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus. Commun Biol. 2020 Jan 7; 3 (1) :2. doi: 10.1038/s42003-019-0727-5. PubMed PMID: 31925306; PubMed Central PMCID: PMC6946681.

Zhong R, Cui D, Richardson EA, Phillips DR, Azadi P, Lu G, Ye ZH. Cytosolic Acetyl-CoA Generated by ATP-Citrate Lyase Is Essential for Acetylation of Cell Wall Polysaccharides. Plant Cell Physiol. 2020 Jan 1; 61 (1) :64-75. doi: 10.1093/pcp/pcz178. PubMed PMID: 31503286.

Ge Y, Gong M, Zadeh M, Li J, Abbott JR, Li W, Morel L, Sonon R, Supekar NT, Azadi P, Wang Y, Jones DP, Li S, Mohamadzadeh M. Regulating colonic dendritic cells by commensal glycosylated large surface layer protein A to sustain gut homeostasis against pathogenic inflammation. Mucosal Immunol. 2020 Jan; 13 (1) :34-46. doi: 10.1038/s41385-019-0210-0. Epub 2019 Oct 16. PubMed PMID: 31619761; PubMed Central PMCID: PMC6917853.

De Leoz MLA, Duewer DL, Fung A, Liu L, Yau HK, Potter O, Staples GO, Furuki K, Frenkel R, Hu Y, Sosic Z, Zhang P, Altmann F, Grunwald-Grube C, Shao C, Zaia J, Evers W, Pengelley S, Suckau D, Wiechmann A, Resemann A, Jabs W, Beck A, Froehlich JW, Huang C, Li Y, Liu Y, Sun S, Wang Y, Seo Y, An HJ, Reichardt NC, Ruiz JE, Archer-Hartmann S, Azadi P, Bell L, Lakos Z, An Y, Cipollo JF, Pucic-Bakovic M, Štambuk J, Lauc G, Li X, Wang PG, Bock A, Hennig R, Rapp E, Creskey M, Cyr TD, Nakano M, Sugiyama T, Leung PA, Link-Lenczowski P, Jaworek J, Yang S, Zhang H, Kelly T, Klapoetke S, Cao R, Kim JY, Lee HK, Lee JY, Yoo JS, Kim SR, Suh SK, de Haan N, Falck D, Lageveen-Kammeijer GSM, Wuhrer M, Emery RJ, Kozak RP, Liew LP, Royle L, Urbanowicz PA, Packer NH, Song X, Everest-Dass A, Lattová E, Cajic S, Alagesan K, Kolarich D, Kasali T, Lindo V, Chen Y, Goswami K, Gau B, Amunugama R, Jones R, Stroop CJM, Kato K, Yagi H, Kondo S, Yuen CT, Harazono A, Shi X, Magnelli PE, Kasper BT, Mahal L, Harvey DJ, O’Flaherty R, Rudd PM, Saldova R, Hecht ES, Muddiman DC, Kang J, Bhoskar P, Menard D, Saati A, Merle C, Mast S, Tep S, Truong J, Nishikaze T, Sekiya S, Shafer A, Funaoka S, Toyoda M, de Vreugd P, Caron C, Pradhan P, Tan NC, Mechref Y, Patil S, Rohrer JS, Chakrabarti R, Dadke D, Lahori M, Zou C, Cairo C, Reiz B, Whittal RM, Lebrilla CB, Wu L, Guttman A, Szigeti M, Kremkow BG, Lee KH, Sihlbom C, Adamczyk B, Jin C, Karlsson NG, Örnros J, Larson G, Nilsson J, Meyer B, Wiegandt A, Komatsu E, Perreault H, Bodnar ED, Said N, Francois YN, Leize-Wagner E, Maier S, Zeck A, Heck AJR, Yang Y, Haselberg R, Yu YQ, Alley W, Leone JW, Yuan H, Stein SE. NIST Interlaboratory Study on Glycosylation Analysis of Monoclonal Antibodies: Comparison of Results from Diverse Analytical Methods. Mol Cell Proteomics. 2020 Jan; 19 (1) :11-30. doi: 10.1074/mcp.RA119.001677. Epub 2019 Oct 7. PubMed PMID: 31591262; PubMed Central PMCID: PMC6944243.

Long L, Azadi P, Chen R. Designer biocatalysts for direct incorporation of exogenous galactose into globotriose. Biotechnol Bioeng. 2020 Jan; 117 (1) :285-290. doi: 10.1002/bit.27198. Epub 2019 Nov 12. PubMed PMID: 31631323.

2019

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

2018

Spiciarich DR, Oh ST, Foley A, Hughes SB, Mauro MJ, Abdel-Wahab O, Press RD, Viner R, Thompson SL, Chen Q, Azadi P, Bertozzi CR, Maxson JE. A Novel Germline Variant in CSF3R Reduces N-Glycosylation and Exerts Potent Oncogenic Effects in Leukemia. Cancer Res. 2018 Dec 15;78(24):6762-6770. doi: 10.1158/0008-5472.CAN-18-1638. Epub 2018 Oct 22. PubMed PMID: 30348809; PubMed Central PMCID: PMC6295230.

Qiu H, Shi S, Yue J, Xin M, Nairn AV, Lin L, Liu X, Li G, Archer-Hartmann SA, Dela Rosa M, Galizzi M, Wang S, Zhang F, Azadi P, van Kuppevelt TH, Cardoso WV, Kimata K, Ai X, Moremen KW, Esko JD, Linhardt RJ, Wang L. A mutant-cell library for systematic analysis of heparan sulfate structure-function relationships. Nat Methods. 2018 Nov;15(11):889-899. doi: 10.1038/s41592-018-0189-6. Epub 2018 Oct 30. PubMed PMID: 30377379; PubMed Central PMCID: PMC6214364.

Borges RM, Taujale R, de Souza JS, de Andrade Bezerra T, Silva ELE, Herzog R, Ponce FV, Wolfender JL, Edison AS. Dereplication of plant phenolics using a mass-spectrometry database independent method. Phytochem Anal. 2018 Nov;29(6):601-612. doi: 10.1002/pca.2773. Epub 2018 May 29. PubMed PMID: 29808582; PubMed Central PMCID: PMC8962509.

Zarnowski R, Sanchez H, Covelli AS, Dominguez E, Jaromin A, Bernhardt J, Mitchell KF, Heiss C, Azadi P, Mitchell A, Andes DR. Candida albicans biofilm-induced vesicles confer drug resistance through matrix biogenesis. PLoS Biol. 2018 Oct;16(10):e2006872. doi: 10.1371/journal.pbio.2006872. eCollection 2018 Oct. PubMed PMID: 30296253; PubMed Central PMCID: PMC6209495.

Chen H, Ambadapadi S, Wakefield D, Bartee M, Yaron JR, Zhang L, Archer-Hartmann SA, Azadi P, Burgin M, Borges C, Zheng D, Ergle K, Muppala V, Morshed S, Rand K, Clapp W, Proudfoot A, Lucas A. Selective Deletion of Heparan Sulfotransferase Enzyme, Ndst1, in Donor Endothelial and Myeloid Precursor Cells Significantly Decreases Acute Allograft Rejection. Sci Rep. 2018 Sep 7;8(1):13433. doi: 10.1038/s41598-018-31779-7. PubMed PMID: 30194334; PubMed Central PMCID: PMC6128922.

Zhang P, Lu H, Peixoto RT, Pines MK, Ge Y, Oku S, Siddiqui TJ, Xie Y, Wu W, Archer-Hartmann S, Yoshida K, Tanaka KF, Aricescu AR, Azadi P, Gordon MD, Sabatini BL, Wong ROL, Craig AM. Heparan Sulfate Organizes Neuronal Synapses through Neurexin Partnerships. Cell. 2018 Sep 6;174(6):1450-1464.e23. doi: 10.1016/j.cell.2018.07.002. Epub 2018 Aug 9. PubMed PMID: 30100184; PubMed Central PMCID: PMC6173057.

Byrne G, O’Rourke SM, Alexander DL, Yu B, Doran RC, Wright M, Chen Q, Azadi P, Berman PW. CRISPR/Cas9 gene editing for the creation of an MGAT1-deficient CHO cell line to control HIV-1 vaccine glycosylation. PLoS Biol. 2018 Aug;16(8):e2005817. doi: 10.1371/journal.pbio.2005817. eCollection 2018 Aug. PubMed PMID: 30157178; PubMed Central PMCID: PMC6133382.

Kang X, Kirui A, Muszyński A, Widanage MCD, Chen A, Azadi P, Wang P, Mentink-Vigier F, Wang T. Molecular architecture of fungal cell walls revealed by solid-state NMR. Nat Commun. 2018 Jul 16;9(1):2747. doi: 10.1038/s41467-018-05199-0. PubMed PMID: 30013106; PubMed Central PMCID: PMC6048167.

Guan N, Shin HD, Long L, Azadi P, Chen R. TCA cycle-powered synthesis of fucosylated oligosaccharides. Glycobiology. 2018 Jul 1;28(7):468-473. doi: 10.1093/glycob/cwy047. PubMed PMID: 29800149.

Pachekrepapol U, Lucey JA, Gong Y, Naran R, Azadi P. Corrigendum to “Characterization of the chemical structures and physical properties of exopolysaccharides produced by various Streptococcus thermophilus strains” (J. Dairy Sci. 100:3424-3435). J Dairy Sci. 2018 Jun;101(6):5668. doi: 10.3168/jds.2018-101-6-5668. PubMed PMID: 29779560.

Chen Y, Bensing BA, Seepersaud R, Mi W, Liao M, Jeffrey PD, Shajahan A, Sonon RN, Azadi P, Sullam PM, Rapoport TA. Unraveling the sequence of cytosolic reactions in the export of GspB adhesin from Streptococcus gordonii. J Biol Chem. 2018 Apr 6;293(14):5360-5373. doi: 10.1074/jbc.RA117.000963. Epub 2018 Feb 9. PubMed PMID: 29462788; PubMed Central PMCID: PMC5892584.

Muszyński A, Heiss C, Hjuler CT, Sullivan JT, Kelly SJ, Thygesen MB, Stougaard J, Azadi P, Carlson RW, Ronson CW. Structures of exopolysaccharides involved in receptor-mediated perception of Mesorhizobium loti by Lotus japonicas. J Biol Chem. 2018 Apr 6;293(14):5376. doi: 10.1074/jbc.AAC118.002877. PubMed PMID: 29626109; PubMed Central PMCID: PMC5892561.

Dominguez E, Zarnowski R, Sanchez H, Covelli AS, Westler WM, Azadi P, Nett J, Mitchell AP, Andes DR. Conservation and Divergence in the CandidaSpecies Biofilm Matrix Mannan-Glucan Complex Structure, Function, and Genetic Control. mBio. 2018 Apr 3;9(2). doi: 10.1128/mBio.00451-18. PubMed PMID: 29615504; PubMed Central PMCID: PMC5885036.

Flanagan-Steet H, Christian C, Lu PN, Aarnio-Peterson M, Sanman L, Archer-Hartmann S, Azadi P, Bogyo M, Steet RA. TGF-ß Regulates Cathepsin Activation during Normal and Pathogenic Development. Cell Rep. 2018 Mar 13;22(11):2964-2977. doi: 10.1016/j.celrep.2018.02.066. PubMed PMID: 29539424; PubMed Central PMCID: PMC6247414.

Shang-Guan K, Wang M, Htwe NMPS, Li P, Li Y, Qi F, Zhang D, Cao M, Kim C, Weng H, Cen H, Black IM, Azadi P, Carlson RW, Stacey G, Liang Y.Lipopolysaccharides Trigger Two Successive Bursts of Reactive Oxygen Species at Distinct Cellular Locations. Plant Physiol. 2018 Mar;176(3):2543-2556. doi: 10.1104/pp.17.01637. Epub 2018 Feb 5. PubMed PMID: 29431629; PubMed Central PMCID: PMC5841728

Blanco-Ulate B, Muszyński A, Figueroa-Balderas R, Morales-Cruz A, Azadi P, Dobruchowska JM, Castro C, Cantu D, Roper MC.Lipopolysaccharide O-antigen delays plant innate immune recognition of Xylella fastidiosa. Nat Commun. 2018 Jan 26;9(1):390. doi: 10.1038/s41467-018-02861-5. PubMed PMID: 29374171; PubMed Central PMCID: PMC5786101.

Tanigaki K, Sacharidou A, Peng J, Chambliss KL, Yuhanna IS, Ghosh D, Ahmed M, Szalai AJ, Vongpatanasin W, Mattrey RF, Chen Q, Azadi P, Lingvay I, Botto M, Holland WL, Kohler JJ, Sirsi SR, Hoyt K, Shaul PW, Mineo C. Hyposialylated IgG activates endothelial IgG receptor FcγRIIB to promote obesity-induced insulin resistance. J Clin Invest. 2018 Jan 2;128(1):309-322. doi: 10.1172/JCI89333. Epub 2017 Nov 27. PubMed PMID: 29202472; PubMed Central PMCID: PMC5749535.

Talabnin K, Talabnin C, Ishihara M, Azadi P. Increased expression of the high-mannose M6N2 and NeuAc3H3N3M3N2F tri-antennary N-glycans in cholangiocarcinoma. Oncol Lett. 2018 Jan;15(1):1030-1036. doi: 10.3892/ol.2017.7384. Epub 2017 Nov 9. PubMed PMID: 29399163; PubMed Central PMCID: PMC5772869.

Tatli M, Ishihara M, Heiss C, Browne D, Dangott L, Vitha S, Azadi P, Devarenne T. Polysaccharide associated protein (PSAP) from the green microalga Botryococcus braunii is a unique extracellular matrix hydroxyproline-rich glycoprotein. Algal research. 2018 January.

Kolinko S, Wu YW, Tachea F, Denzel E, Hiras J, Gabriel R, Bäcker N, Chan LJG, Eichorst SA, Frey D, Chen Q, Azadi P, Adams PD, Pray TR, Tanjore D, Petzold CJ, Gladden JM, Simmons BA, Singer SW. A bacterial pioneer produces cellulase complexes that persist through community succession. Nat Microbiol.2018 Jan;3(1):99-107. doi: 10.1038/s41564-017-0052-z. Epub 2017 Nov 6. PubMed PMID: 29109478; PubMed Central PMCID: PMC6794216.

2017

Amore A, Knott BC, Supekar NT, Shajahan A, Azadi P, Zhao P, Wells L, Linger JG, Hobdey SE, Vander Wall TA, Shollenberger T, Yarbrough JM, Tan Z, Crowley MF, Himmel ME, Decker SR, Beckham GT, Taylor LE 2nd. Distinct roles of N- and O-glycans in cellulase activity and stability. Proc Natl Acad Sci U S A. 2017 Dec 26;114(52):13667-13672. doi: 10.1073/pnas.1714249114. Epub 2017 Dec 11. PubMed PMID: 29229855; PubMed Central PMCID: PMC5748201.

Hamilton BS, Wilson JD, Shumakovich MA, Fisher AC, Brooks JC, Pontes A, Naran R, Heiss C, Gao C, Kardish R, Heimburg-Molinaro J, Azadi P, Cummings RD, Merritt JH, DeLisa MP. A library of chemically defined human N-glycans synthesized from microbial oligosaccharide precursors. Sci Rep. 2017 Nov 21;7(1):15907. doi: 10.1038/s41598-017-15891-8. PubMed PMID: 29162910; PubMed Central PMCID: PMC5698433.

Sheikh MO, Thieker D, Chalmers G, Schafer CM, Ishihara M, Azadi P, Woods RJ, Glushka JN, Bendiak B, Prestegard JH, West CM. O₂ sensing-associated glycosylation exposes the F-box-combining site of the Dictyostelium Skp1 subunit in E3 ubiquitin ligases. J Biol Chem. 2017 Nov 17;292(46):18897-18915. doi: 10.1074/jbc.M117.809160. Epub 2017 Sep 19. PubMed PMID: 28928219; PubMed Central PMCID: PMC5704474.

Chen Y, Bensing B, Seepersaud R, Mi W, Liao M, Jeffrey P, Shajahan A, Sonon R, Azadi P, Sullam P, Rapoport T. Structure and function of accessory Sec proteins involved in the adhesion export pathway of Streptococcus gordonii. bioRxiv. 2017 November.

Shajahan A, Supekar NT, Heiss C, Ishihara M, Azadi P. Tool for Rapid Analysis of Glycopeptide by Permethylation via One-Pot Site Mapping and Glycan Analysis. Anal Chem. 2017 Oct 17;89(20):10734-10743. doi: 10.1021/acs.analchem.7b01730. Epub 2017 Oct 2. PubMed PMID: 28921966; PubMed Central PMCID: PMC5973789.

Matsuzaki C, Takagaki C, Tomabechi Y, Forsberg LS, Heiss C, Azadi P, Matsumoto K, Katoh T, Hosomi K, Kunisawa J, Yamamoto K, Hisa K. Structural characterization of the immunostimulatory exopolysaccharide produced by Leuconostoc mesenteroides strain NTM048. Carbohydr Res. 2017 Aug 7;448:95-102. doi: 10.1016/j.carres.2017.06.004. Epub 2017 Jun 15. PubMed PMID: 28633071.

Li Y, Fu J, Ling Y, Yago T, McDaniel JM, Song J, Bai X, Kondo Y, Qin Y, Hoover C, McGee S, Shao B, Liu Z, Sonon R, Azadi P, Marth JD, McEver RP, Ruan C, Xia L.Sialylation on O-glycans protects platelets from clearance by liver Kupffer cells. Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):8360-8365. doi: 10.1073/pnas.1707662114. Epub 2017 Jul 17. PubMed PMID: 28716912; PubMed Central PMCID: PMC5547648.

Shajahan A, Heiss C, Ishihara M, Azadi P. Glycomic and glycoproteomic analysis of glycoproteins-a tutorial. Anal Bioanal Chem. 2017 Jul;409(19):4483-4505. doi: 10.1007/s00216-017-0406-7. Epub 2017 Jun 6. PubMed PMID: 28585084; PubMed Central PMCID: PMC5498624.

Lowery CL 3rd, Elliott C, Cooper A, Hadden C, Sonon RN, Azadi P, Williams DK, Marsh JD, Woulfe DS, Kilic F. Cigarette Smoking-Associated Alterations in Serotonin/Adrenalin Signaling Pathways of Platelets. J Am Heart Assoc. 2017 May 18;6(5). doi: 10.1161/JAHA.116.005465. PubMed PMID: 28522678; PubMed Central PMCID: PMC5524091.

Pachekrepapol U, Lucey JA, Gong Y, Naran R, Azadi P. Characterization of the chemical structures and physical properties of exopolysaccharides produced by various Streptococcus thermophilus strains. J Dairy Sci. 2017 May;100(5):3424-3435. doi: 10.3168/jds.2016-12125. Epub 2017 Mar 16. PubMed PMID: 28318581.

Zhou Y, Badgett MJ, Billard L, Bowen JH, Orlando R, Willis JH. Properties of the cuticular proteins of Anopheles gambiae as revealed by serial extraction of adults. PLoS One. 2017;12(4):e0175423. doi: 10.1371/journal.pone.0175423. eCollection 2017. PubMed PMID: 28419115; PubMed Central PMCID: PMC5395146.

Woo CM, Felix A, Byrd WE, Zuegel DK, Ishihara M, Azadi P, Iavarone AT, Pitteri SJ, Bertozzi CR. Development of IsoTaG, a Chemical Glycoproteomics Technique for Profiling Intact N- and O-Glycopeptides from Whole Cell Proteomes. J Proteome Res. 2017 Apr 7;16(4):1706-1718. doi: 10.1021/acs.jproteome.6b01053. Epub 2017 Feb 28. PubMed PMID: 28244757; PubMed Central PMCID: PMC5507588.

Kintz E, Heiss C, Black I, Donohue N, Brown N, Davies MR, Azadi P, Baker S, Kaye PM, van der Woude M. Salmonella enterica Serovar Typhi Lipopolysaccharide O-Antigen Modification Impact on Serum Resistance and Antibody Recognition. Infect Immun. 2017 Apr;85(4). doi: 10.1128/IAI.01021-16. Print 2017 Apr. PubMed PMID: 28167670; PubMed Central PMCID: PMC5364305.

2016

Starr KF, Porsch EA, Seed PC, Heiss C, Naran R, Forsberg LS, Amit U, Yagupsky P, Azadi P, St Geme JW 3rd. Kingella kingae Expresses Four Structurally Distinct Polysaccharide Capsules That Differ in Their Correlation with Invasive Disease. PLoS Pathog. 2016 Oct;12(10):e1005944. doi: 10.1371/journal.ppat.1005944. eCollection 2016 Oct. PubMed PMID: 27760194; PubMed Central PMCID: PMC5070880.

Edgar RJ, Chen J, Kant S, Rechkina E, Rush JS, Forsberg LS, Jaehrig B, Azadi P, Tchesnokova V, Sokurenko EV, Zhu H, Korotkov KV, Pancholi V, Korotkova N.SpyB, a Small Heme-Binding Protein, Affects the Composition of the Cell Wall in Streptococcus pyogenes. Front Cell Infect Microbiol. 2016;6:126. doi: 10.3389/fcimb.2016.00126. eCollection 2016. PubMed PMID: 27790410; PubMed Central PMCID: PMC5061733.

Alcántara MÁ, Dobruchowska J, Azadi P, García BD, Molina-Heredia FP, Reyes-Sosa FM. Recalcitrant carbohydrates after enzymatic hydrolysis of pretreated lignocellulosic biomass. Biotechnol Biofuels. 2016;9:207. doi: 10.1186/s13068-016-0629-4. eCollection 2016. PubMed PMID: 27713766; PubMed Central PMCID: PMC5052873.

Zong C, Huang R, Condac E, Chiu Y, Xiao W, Li X, Lu W, Ishihara M, Wang S, Ramiah A, Stickney M, Azadi P, Amster IJ, Moremen KW, Wang L, Sharp JS, Boons GJ. Integrated Approach to Identify Heparan Sulfate Ligand Requirements of Robo1. J Am Chem Soc. 2016 Oct 5;138(39):13059-13067. doi: 10.1021/jacs.6b08161. Epub 2016 Sep 27. PubMed PMID: 27611601; PubMed Central PMCID: PMC5068570.

Muszyński A, Heiss C, Hjuler CT, Sullivan JT, Kelly SJ, Thygesen MB, Stougaard J, Azadi P, Carlson RW, Ronson CW. Structures of Exopolysaccharides Involved in Receptor-mediated Perception of Mesorhizobium loti by Lotus japonicus. J Biol Chem. 2016 Sep 30;291(40):20946-20961. doi: 10.1074/jbc.M116.743856. Epub 2016 Aug 8. PubMed PMID: 27502279; PubMed Central PMCID: PMC5076507.

Mehta N, Porterfield M, Struwe WB, Heiss C, Azadi P, Rudd PM, Tiemeyer M, Aoki K. Mass Spectrometric Quantification of N-Linked Glycans by Reference to Exogenous Standards. J Proteome Res. 2016 Sep 2;15(9):2969-80. doi: 10.1021/acs.jproteome.6b00132. Epub 2016 Aug 5. PubMed PMID: 27432553; PubMed Central PMCID: PMC5501980.

Spears PA, Havell EA, Hamrick TS, Goforth JB, Levine AL, Abraham ST, Heiss C, Azadi P, Orndorff PE. Listeria monocytogenes wall teichoic acid decoration in virulence and cell-to-cell spread. Mol Microbiol. 2016 Sep;101(5):714-30. doi: 10.1111/mmi.13353. Epub 2016 Mar 10. PubMed PMID: 26871418.

Chen L, Valentine JL, Huang CJ, Endicott CE, Moeller TD, Rasmussen JA, Fletcher JR, Boll JM, Rosenthal JA, Dobruchowska J, Wang Z, Heiss C, Azadi P, Putnam D, Trent MS, Jones BD, DeLisa MP. Outer membrane vesicles displaying engineered glycotopes elicit protective antibodies. Proc Natl Acad Sci U S A. 2016 Jun 28;113(26):E3609-18. doi: 10.1073/pnas.1518311113. Epub 2016 Jun 6. PubMed PMID: 27274048; PubMed Central PMCID: PMC4932928.

Valentine JL, Chen L, Perregaux EC, Weyant KB, Rosenthal JA, Heiss C, Azadi P, Fisher AC, Putnam D, Moe GR, Merritt JH, DeLisa MP. Immunization with Outer Membrane Vesicles Displaying Designer Glycotopes Yields Class-Switched, Glycan-Specific Antibodies. Cell Chem Biol. 2016 Jun 23;23(6):655-65. doi: 10.1016/j.chembiol.2016.05.014. PubMed PMID: 27341433; PubMed Central PMCID: PMC5116915.

Ito H, Kaji H, Togayachi A, Azadi P, Ishihara M, Geyer R, Galuska C, Geyer H, Kakehi K, Kinoshita M, Karlsson NG, Jin C, Kato K, Yagi H, Kondo S, Kawasaki N, Hashii N, Kolarich D, Stavenhagen K, Packer NH, Thaysen-Andersen M, Nakano M, Taniguchi N, Kurimoto A, Wada Y, Tajiri M, Yang P, Cao W, Li H, Rudd PM, Narimatsu H. Comparison of analytical methods for profiling N- and O-linked glycans from cultured cell lines : HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study. Glycoconj J. 2016 Jun;33(3):405-415. doi: 10.1007/s10719-015-9625-3. Epub 2015 Oct 28. PubMed PMID: 26511985; PubMed Central PMCID: PMC4848167.

Ma L, Chen Z, Huang da W, Kutty G, Ishihara M, Wang H, Abouelleil A, Bishop L, Davey E, Deng R, Deng X, Fan L, Fantoni G, Fitzgerald M, Gogineni E, Goldberg JM, Handley G, Hu X, Huber C, Jiao X, Jones K, Levin JZ, Liu Y, Macdonald P, Melnikov A, Raley C, Sassi M, Sherman BT, Song X, Sykes S, Tran B, Walsh L, Xia Y, Yang J, Young S, Zeng Q, Zheng X, Stephens R, Nusbaum C, Birren BW, Azadi P, Lempicki RA, Cuomo CA, Kovacs JA. Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts. Nat Commun. 2016 Feb 22;7:10740. doi: 10.1038/ncomms10740. PubMed PMID: 26899007; PubMed Central PMCID: PMC4764891.

Heiss C, Wang Z, Black I, Azadi P, Fichorova RN, Singh BN. Novel structural features of the immunocompetent ceramide phospho-inositol glycan core from Trichomonas vaginalis. Carbohydr Res. 2016 Jan;419:51-9. doi: 10.1016/j.carres.2015.11.001. Epub 2015 Nov 10. PubMed PMID: 26671321; PubMed Central PMCID: PMC4698206.

Azadi P, Heiss C. Structural Analysis of Glycosaminoglycans – An Indispensable Tool for the Diagnosis, Treatment and Prevention of Human Disease. In:Glycobiology and Human Diseases Boca Raton, Florida: CRC Press; 2016. Chapter 2; p.28-64. 323p.

Talabnin K, Talabnin C, Ishihara M, Azadi P, Wongkham S, Sripa B. Differential Expression of O-glycoprotein Glycans in Cholangiocarcinoma Cell Lines. Asian Pac J Cancer Prev. 2016;17(2):691-5. doi: 10.7314/apjcp.2016.17.2.691. PubMed PMID: 26925665; PubMed Central PMCID: PMC4809418.

Porfírio S, Gomes da Silva MDR, Peixe A, Cabrita MJ, Azadi P. Current analytical methods for plant auxin quantification–A review. Anal Chim Acta. 2016 Jan 1;902:8-21. doi: 10.1016/j.aca.2015.10.035. Epub 2015 Nov 6. Review. PubMed PMID: 26703249.

2015

Ito H, Kaji H, Togayachi A, Azadi P, Ishihara M, Geyer R, Galuska C, Geyer H, Kakehi K, Kinoshita M, Karlsson NG, Jin C, Kato K, Yagi H, Kondo S, Kawasaki N, Hashii N, Kolarich D, Stavenhagen K, Packer NH, Thaysen-Andersen M, Nakano M, Taniguchi N, Kurimoto A, Wada Y, Tajiri M, Yang P, Cao W, Li H, Rudd PM, Narimatsu H. (2015) Comparison of analytical methods for profiling N- and O-linked glycans from cultured cell lines : HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study. Glycoconj J. 28 PMID: 26511985

Erikson E, Wratil PR, Frank M, Ambiel I, Pahnke K, Pino M, Azadi P, Izquierdo-UsernosN, Martinez-Picado J, Meier C. Schnaar RL, Crocker PR, Reutter W, Keppler OT. (2015) Mouse Siglec-1 Mediates trans-Infection of Surface-bound Murine Leukemia Virus in a Sialic Acid N-Acyl Side Chain-dependent Manner. The Journal of biological chemistry. 290(45):27345-59. PMID:26370074

Peres da Silva R, Heiss C, Black I, Azadi P, Gerlach JQ, Travassos LR, Joshi L, Kilcoyne M, Puccia R. (2015) Extracellular vesicles from Paracoccidioides pathogenic species transport polysaccharide and expose ligands for DC-SIGN receptors. Sci Rep. Sept 21;5:14213. Doi:10.1038/srep 14213. PMID 26387503

Zhong M, Zhang H, Reilly JP, Christie JD, Ishihara M, Kumagai T, Azadi P, Reilly MP. (2015) ABO Blood Group as a Model for Platelet Glycan Modification in Arterial Thrombosis. Arteriosclerosis, thrombosis and vascular biology. 35(7):1570-8. NIHMSID: MIHMS695666. PMID:25776750 PMCID: PMC4399047

Wikraiphat C, Saiprom N, Tandhavanant S, Heiss C, Azadi P, Wongsuvan G, Tuanyok A, Holden MT, Burtnick MN, Brett PJ, Peacock SJ, Chantratita N. (2015) Colony Morphology Variation of Burkholderia Pseudomallei is Associated with Antigenic Variation and O-Polysaccharide Modifications. Infect Immun. May 2015;83(5):2127-38. Doi:10.1128/IAI.02785-14. PMID: 25776750

Suarez G, Romero-Gallo J, Piazuelo M, Wang G, Maier R, Forsberg L, Azadi P, Gomez M, Correa P, Peek R. (2015) Modification of helicobacter pylori peptidoglycan enhances NOD1 activation and promotes cancers of the stomach. Journal of Cancer Research. DOI: 10.1158/008-5472. CAN-14-2291.Cancer Res. 2015 Apr 15;75(8):1749-59: doi: 10.1158/0008-5472.CAN-14-2291. PMID:25732381

Köseoğlu VK, Heiss C, Azadi P, Topchiy E, Güvener ZT, Lehmann TE, Miller KW, Gomelsky M. Listeria monocytogenes exopolysaccharide: origin, structure, biosynthetic machinery and c-di-GMP-dependent regulation. Mol Microbiol. 2015 May;96(4):728-43. . doi: 10.1111/mmi.12966. [Epub ahead of print ]  PMID:25662512

DePaoli-Roach A, Contreras C, Segvich D, Heiss C, Ishihara M, Azadi P, Roach P. (2015) Glycogen phosphomonoester distribution in mouse models of the progressive myoclonic epilepsy, Lafora disease. J Biol Chem. Jan 9; 290(2)841-850. doi: 10.1074/jbc.M114.607796. Epub 2014 Nov 21. PMID:25416783 PMCID:4294506

Lin N, Mascarenhas J, Sealover N, George H, Brooks J, Kayser K, Gau B, Yasa I, Azadi P, Archer-Hartmann S. (2015) Chinese hamster ovary (CHO) host cell engineering to increase sialylation of recombinant therapeutic proteins by modulating sialyltransferase expression. Biotechnol Prog. 2015 Mar;31(2) 334-346 doi: 10.1002/btpr.2038. PMID:25641927

2014

Brennan PJ, Tatituri RV, Heiss C, Watts GF, Hsu FF, Veerapen N, Cox LR, Azadi P, Besra GS, Brenner MB. Activation of iNKT cells by a distinct constituent of the endogenous glucosylceramide fraction. Proc Natl Acad Sci U S A. 2014 Sep 16;111(37):13433-8. doi: 10.1073/pnas.1415357111. Epub 2014 Sep 2. PubMed PMID: 25197085; PubMed Central PMCID: PMC4169973.

Piek S, Wang Z, Ganguly J, Lakey AM, Bartley SN, Mowlaboccus S, Anandan A, Stubbs KA, Scanlon MJ, Vrielink A, Azadi P, Carlson RW, Kahler CM. The role of oxidoreductases in determining the function of the neisserial lipid A phosphoethanolamine transferase required for resistance to polymyxin. PLoS One. 2014;9(9):e106513. doi: 10.1371/journal.pone.0106513. eCollection 2014. PubMed PMID: 25215579; PubMed Central PMCID: PMC4162559.

Yoneda A, Kuo HW, Ishihara M, Azadi P, Yu SM, Ho TH. Glycosylation variants of a β-glucosidase secreted by a Taiwanese fungus, Chaetomella raphigera, exhibit variant-specific catalytic and biochemical properties. PLoS One. 2014;9(9):e106306. doi: 10.1371/journal.pone.0106306. eCollection 2014. PubMed PMID: 25180973; PubMed Central PMCID: PMC4152272.

Gasimli L, Hickey AM, Yang B, Li G, dela Rosa M, Nairn AV, Kulik MJ, Dordick JS, Moremen KW, Dalton S, Linhardt RJ. Changes in glycosaminoglycan structure on differentiation of human embryonic stem cells towards mesoderm and endoderm lineages. Biochim Biophys Acta. 2014 Jun;1840(6):1993-2003. doi: 10.1016/j.bbagen.2014.01.007. Epub 2014 Jan 9. PubMed PMID: 24412195; PubMed Central PMCID: PMC4004645.

Kumar P, Heiss C, Santiago-Tirado FH, Black I, Azadi P, Doering TL. Pbx proteins in Cryptococcus neoformans cell wall remodeling and capsule assembly.Eukaryot Cell. 2014 May;13(5):560-71. doi: 10.1128/EC.00290-13. Epub 2014 Feb 28. PubMed PMID: 24585882; PubMed Central PMCID: PMC4060484.

Zhang Z, Mooney C, Ishihara M, Kumagai T, Stalnaker S, Park S, Veillion L, Hinkle C, Stout M, Yang W, VanDorn D, Chou S, Bhang DH, Ryeom S, Tiemeyer M, Wells L, Azadi P, Reilly M. ABO modulation of endothelial phenotypes and glycome profile in human induced pluripotent stem cell-derived endothelial cells. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2014 April; 28(1):1003.2.

Azadi P, Ishihara M, Kumagai T, Stalnaker S, Zhang Z, Park S, Wells L, Tiemeyer M. Glycomics analysis of resting and activated human platelets. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2014 April; 28(1):789.1.

Ballantyne R, Qu L, Liu J, Nairn A, Li W, Azadi P, Zhang H, Wells L, Tiemeyer M, Moremen K, Christie J, Li M, Zhou X, Reilly M. Glycogenome signatures in complex cardiometabolic disease. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 2014 April; 28(1):789.4.

Stone JK, Heiss C, Wang Z, Black I, Grasso SA, Koppisch AT, Azadi P, Keim P, Tuanyok A. Structural characterization of polysaccharides expressed by Burkholderia oklahomensis E0147. Carbohydr Res. 2014 Mar 11;386:68-72. doi: 10.1016/j.carres.2013.08.011. Epub 2013 Aug 25. PubMed PMID: 24491843.

Nasirikenari M, Veillon L, Collins CC, Azadi P, Lau JTY. Remodeling of marrow hematopoietic stem and progenitor cells by non-self ST6Gal-1 sialyltransferase. J Biol Chem. 2014 Mar 7;289(10):7178-7189. doi: 10.1074/jbc.M113.508457. Epub 2014 Jan 14. PubMed PMID: 24425878; PubMed Central PMCID: PMC3945377.

Nguyen T, Chang S, Condon B, Thomas T, Azadi P. Thermal decomposition reactions of cotton fabric treated with piperazine-phosphonates derivatives as a flame retardant. Journal of analytical and applied pyrolysis. 2014; 111(37):13433-13438. doi: 10/1371/journal.pone.0106513.

Zhang B, Xiao W, Qiu H, Zhang F, Moniz HA, Jaworski A, Condac E, Gutierrez-Sanchez G, Heiss C, Clugston RD, Azadi P, Greer JJ, Bergmann C, Moremen KW, Li D, Linhardt RJ, Esko JD, Wang L. Heparan sulfate deficiency disrupts developmental angiogenesis and causes congenital diaphragmatic hernia. J Clin Invest. 2014 Jan;124(1):209-21. doi: 10.1172/JCI71090. Epub 2013 Dec 20. PubMed PMID: 24355925; PubMed Central PMCID: PMC3871243.

2013

Xu Y, Chen CF, Thomas TP, Azadi P, Diehl B, Tsai CJ, Brown N, Carlson JE, Tien M, Liang H. Wood chemistry analysis and expression profiling of a poplar clone expressing a tyrosine-rich peptide. Plant Cell Rep. 2013 Dec;32(12):1827-41. doi: 10.1007/s00299-013-1496-0. Epub 2013 Sep 7. PubMed PMID: 24013761.

Meng L, Forouhar F, Thieker D, Gao Z, Ramiah A, Moniz H, Xiang Y, Seetharaman J, Milaninia S, Su M, Bridger R, Veillon L, Azadi P, Kornhaber G, Wells L, Montelione GT, Woods RJ, Tong L, Moremen KW. Enzymatic basis for N-glycan sialylation: structure of rat α2,6-sialyltransferase (ST6GAL1) reveals conserved and unique features for glycan sialylation. J Biol Chem. 2013 Nov 29;288(48):34680-98. doi: 10.1074/jbc.M113.519041. Epub 2013 Oct 23. PubMed PMID: 24155237; PubMed Central PMCID: PMC3843080.

Heiss C, Burtnick MN, Roberts RA, Black I, Azadi P, Brett PJ. Revised structures for the predominant O-polysaccharides expressed by Burkholderia pseudomallei and Burkholderia mallei. Carbohydr Res. 2013 Nov 15;381:6-11. doi: 10.1016/j.carres.2013.08.013. Epub 2013 Aug 24. PubMed PMID: 24056008; PubMed Central PMCID: PMC3923507.

Kittur FS, Bah M, Archer-Hartmann S, Hung CY, Azadi P, Ishihara M, Sane DC, Xie J. Cytoprotective effect of recombinant human erythropoietin produced in transgenic tobacco plants. PLoS One. 2013;8(10):e76468. doi: 10.1371/journal.pone.0076468. eCollection 2013. PubMed PMID: 24124563; PubMed Central PMCID: PMC3790672.

Starr KF, Porsch EA, Heiss C, Black I, Azadi P, St Geme JW 3rd. Characterization of the Kingella kingae polysaccharide capsule and exopolysaccharide.PLoS One. 2013;8(9):e75409. doi: 10.1371/journal.pone.0075409. eCollection 2013. PubMed PMID: 24098695; PubMed Central PMCID: PMC3787102.

Mercado CP, Quintero MV, Li Y, Singh P, Byrd AK, Talabnin K, Ishihara M, Azadi P, Rusch NJ, Kuberan B, Maroteaux L, Kilic F. A serotonin-induced N-glycan switch regulates platelet aggregation. Sci Rep. 2013 Sep 30;3:2795. doi: 10.1038/srep02795. PubMed PMID: 24077408; PubMed Central PMCID: PMC3786303.

Bubendorfer S, Ishihara M, Dohlich K, Heiss C, Vogel J, Sastre F, Panico M, Hitchen P, Dell A, Azadi P, Thormann KM. Analyzing the modification of the Shewanella oneidensis MR-1 flagellar filament. PLoS One. 2013;8(9):e73444. doi: 10.1371/journal.pone.0073444. eCollection 2013. PubMed PMID: 24039942; PubMed Central PMCID: PMC3765264.

Layher JW Jr, Poling JS, Ishihara M, Azadi P, Alvarez-Manilla G, Puett D. A Possible Effect of Concentrated Oolong Tea Causing Transient Ischemic Attack-Like Symptoms. Br J Med Med Res. 2013 Jul 18;3(4):2157-2172. doi: 10.9734/BJMMR/2013/4703. PubMed PMID: 24900951; PubMed Central PMCID: PMC4041283.

Xu Y, Thammannagowda S, Thomas T, Azadi P, Schlarbaum SE, Liang H. LtuCAD1 is a cinnamyl alcohol dehydrogenase ortholog involved in lignin biosynthesis in Liriodendron tulipifera L., a basal angiosperm timber species. Plant molecular biology reporter / ISPMB. 2013 May; :1089-1099.

Bayne AC, Boltz D, Owen C, Betz Y, Maia G, Azadi P, Archer-Hartmann S, Zirkle R, Lippmeier JC. Vaccination against influenza with recombinant hemagglutinin expressed by Schizochytrium sp. confers protective immunity. PLoS One. 2013;8(4):e61790. doi: 10.1371/journal.pone.0061790. Print 2013. PubMed PMID: 23626728; PubMed Central PMCID: PMC3634000.

Heiss C, Skowyra ML, Liu H, Klutts JS, Wang Z, Williams M, Srikanta D, Beverley SM, Azadi P, Doering TL. Unusual galactofuranose modification of a capsule polysaccharide in the pathogenic yeast Cryptococcus neoformans. J Biol Chem. 2013 Apr 19;288(16):10994-1003. doi: 10.1074/jbc.M112.441998. Epub 2013 Feb 13. PubMed PMID: 23408430; PubMed Central PMCID: PMC3630864.

Kataeva I, Foston M, Yang S, Pattathil S, Biswal A, Farris L, Poole I, Basen M, Rhaesa A, Thomas T, Azadi P, Olman V, Safford T, Mohler K, Lewis D, Doeppke C, Zeng Y, York W, David M, Mohnen D, Xu Y, Ragauskas A, Ding S, Kelly R, Hahn M, Adams M. Carbohydrate and lignin are simultaneously solubilized from unpretreated switchgrass by microbial action at high temperature. Energy & environmental science. 2013; 6:2186-2195. doi: 10.1039/C3EE40932E.

Kataeva I, Foston M, Yang SJ, Pattathil S, Biswal AK, Farris L, Poole II, Basen M, Rhaesa AM, Thomas TP, Azadi P, Olman V, Saffold TD, Mohler KE, Lewis DL, Doeppke C, Zeng Y, Tschaplinski T, York WS, David M, Mohnen D, Xu Y, Ragauskas AJ, Ding SY, Kelly RM, Hahn M, Adams M. Carbohydrate and lignin are simulatneously solubilized from unpretreated switchgrass by microbial action at high temperature. Energy & environmental science. 2013; 6:2186-2195.

2012

Burtnick MN, Heiss C, Schuler AM, Azadi P, Brett PJ. (2012) Development of novel O-polysaccharide based glycoconjugates for immunization against glanders. Front Cell Infect Microbiol.  Nov 27;2:148. doi: 10.3389/fcimb.2012.00148. eCollection 2012.PMID:23205347 PCMID:PMC3506924

Heiss C, Burtnick MN, Black I, Azadi P, Brett PJ. (2012) Detailed structural analysis of the O-polysaccharide expressed by Burkholderia thailandensis E264. Carbohydr Res. 2012 Dec 1;363:23-8. doi: 10.1016/j.carres.2012.09.027. Epub 2012 Oct 11. PMID:23103510 PCMID:PMC3496072

Cline A, Gao N, Flanagan-Steet H, Sharma V, Rosa S, Sonon R, Azadi P, Sadler KC, Freeze HH, Lehrman MA, Steet R. (2012)A zebrafish model of PMM2-CDG reveals altered neurogenesis and a substrate-accumulation mechanism for N-linked glycosylation deficiency. Mol Biol Cell. Nov;23(21):4175-87. doi: 10.1091/mbc.E12-05-0411. Epub 2012 Sep 5. PMID:22956764 PMCID:PMC3484097

Lee G, Azadi P. (2012) Peptide Mapping and Glycoanalysis of Cancer Cell-Expressed Glycoproteins CA215 Recognized by RP215 Monoclonal Antibody. Journal of Carbohydrate Chemistry. Vol 21, (1) doi: 10.1080/07328303.2011.626544.

Weiss TL, Roth R, Goodson C, Vitha S, Black I, Azadi P, Rusch J, Holzenburg A, Devarenne TP, Goodenough U. (2012) Colony organization in the green alga Botryococcus braunii (Race B) is specified by a complex extracellular matrix. Eukaryot Cell. Dec;11(12):1424-40. doi: 10.1128/EC.00184-12. Epub 2012 Aug 31.PMID:22941913 PMCID:PMC3536293

Burtnick MN, Heiss C, Roberts RA, Schweizer HP, Azadi P, Brett PJ. (2012) Development of capsular polysaccharide-based glycoconjugates for immunization against melioidosis and glanders. Front Cell Infect Microbiol. 2012 Aug 15;2:108. doi: 10.3389/fcimb.2012.00108. eCollection 2012. PMID:22912938 PCMID:PMC3419357

Rillahan CD, Antonopoulos A, Lefort CT, Sonon R, Azadi P, Ley K, Dell A, Haslam SM, Paulson JC. (2012) Global metabolic inhibitors of sialyl- and fucosyltransferases remodel the glycome. Nat Chem Biol.  Jul;8(7):661-8. doi: 10.1038/nchembio.999. Epub 2012 Jun 10. PMID:22683610 PMCID:PMC3427410

Condac E, Strachan H, Gutierrez-Sanchez G, Brainard B, Giese C, Heiss C, Johnson D, Azadi P, Bergmann C, Orlando R, Esmon CT, Harenberg J, Moremen K, Wang L. (2012) The C-terminal fragment of axon guidance molecule Slit3 binds heparin and neutralizes heparin’s anticoagulant activity. Glycobiology.  Sep;22(9):1183-92. doi: 10.1093/glycob/cws087. Epub 2012 May 28.

Valderrama-Rincon JD, Fisher AC, Merritt JH, Fan YY, Reading CA, Chhiba K, Heiss C, Azadi P, Aebi M, DeLisa MP. (2012) An engineered eukaryotic protein glycosylation pathway in Escherichia coli. Nat Chem Biol. Mar 25;8(5):434-6. doi: 10.1038/nchembio.921. PMID:22446837 PMCID:PMC3449280

Pomin VH, Park Y, Huang R, Heiss C, Sharp JS, Azadi P, Prestegard JH. (2012) Exploiting enzyme specificities in digestions of chondroitin sulfates A and C: production of well-defined hexasaccharides. Glycobiology. Jun;22(6):826-38. doi: 10.1093/glycob/cws055. Epub 2012 Feb 17. PMID:22345629 PMCID:PMC3336870

Heiss C, Burtnick MN, Wang Z, Azadi P, Brett PJ. (2012) Structural analysis of capsular polysaccharides expressed by Burkholderia mallei and Burkholderia pseudomallei. Carbohydr Res.  Feb 15;349:90-4. doi: 10.1016/j.carres.2011.12.011. Epub 2011 Dec 23. PMID:22221792

Zhao H, Deneau J, Che GO, Li S, Vagnini F, Azadi P, Sonon R, Ramjit R, Lee SM, Bojanowski K. (2012) Angelica sinensis isolate SBD.4: composition, gene expression profiling, mechanism of action and effect on wounds, in rats and humans. Eur J Dermatol. Jan-Feb;22(1):58-67. doi: 10.1684/ejd.2011.1599. PMID:22146555

Israel B, Garner ST, Thakare M, Elder D. Abney T, Azadi P, Beach JW, Price JC, Ahmed H, Capomacchia AC.  (2012)  Transdermal permeation of novel n-acetyl-glucosamine/NSAIDs mutual prodrugs. Pharm Dev Technol. Jan-Feb;17(1):48-54. 10.3109/10837450.2010.513987. Spub 2010 Sep 21. PMID: 20858066

2011

Gomathinayagam S, Mitchell T, Zartler ER, Heiss C, Azadi P, Zha D, Houston-Cummings NR, Jiang Y, Li F, Giaccone E, Porambo RJ, Anderson CL, Sethuraman N, Li H, Stadheim TA. (2011) Structural elucidation of an α-1,2-mannosidase resistant oligosaccharide produced in Pichia pastoris. Glycobiology. Dec;21(12):1606-15. doi: 10.1093/glycob/cwr082. Epub 2011 Jul 27. PMID:21798867

Bandara AB, Champion AE, Wang X, Berg G, Apicella MA, McLendon M, Azadi P, Snyder DS, Inzana TJ. (2011) Isolation and mutagenesis of a capsule-like complex (CLC) from Francisella tularensis, and contribution of the CLC to F. tularensis virulence in mice. PLoS One.  Apr 22;6(4):e19003. doi: 10.1371/journal.pone.0019003. PMID:21544194 PMCID:PMC3081320

Tagliabracci VS, Heiss C, Karthik C, Contreras CJ, Glushka J, Ishihara M, Azadi P, Hurley TD, DePaoli-Roach AA, Roach PJ. (2011) Phosphate incorporation during glycogen synthesis and Lafora disease. Cell Metab.  Mar 2;13(3):274-82. doi: 10.1016/j.cmet.2011.01.017. PMID:21356517 PMCID:PMC2134772

Pan Y, Wang Z, Yang L, Wang Z, Shi L, Naran R, Azadi P, Xu F. (2011) Differences in cell wall components and allocation of boron to cell walls confer variations in sensitivities of Brassica napus cultivars to boron deficiency. Plant Soil. doi: 10.1007/s11104-011-1074-6.

Heiss C, Wang Z, Azadi P. (2011) Sodium hydroxide permethylation of heparin disaccharides. Rapid Commun Mass Spectrom.  Mar 30;25(6):774-8. doi: 10.1002/rcm.4930. PMID:21337639 PMCID:PMC3928630

Brett PJ, Burtnick MN, Heiss C, Azadi P, DeShazer D, Woods DE, Gherardini FC. (2011),Burkholderia thailandensis oacA mutants facilitate the expression of Burkholderia mallei-like O polysaccharides. Infect Immun. Feb;79(2):961-9. doi: 10.1128/IAI.01023-10. Epub 2010 Nov 29. PMID:21115721

2010

Israel B, Garner ST, Thakare M, Elder D, Abney T, Azadi P, Beach JW, Price JC, Ahmed H, Capomacchia AC. (2012) Transdermal permeation of novel n-acetyl-glucosamine/NSAIDs mutual prodrugs. Pharm Dev Technol.  Jan-Feb;17(1):48-54. doi: 10.3109/10837450.2010.513987. Epub 2010 Sep 21. PMID:20858066

Wada Y, Dell A, Haslam SM, Tissot B, Canis K, Azadi P, Bäckström M, Costello CE, Hansson GC, Hiki Y, Ishihara M, Ito H, Kakehi K, Karlsson N, Hayes CE, Kato K, Kawasaki N, Khoo KH, Kobayashi K, Kolarich D, Kondo A, Lebrilla C, Nakano M, Narimatsu H, Novak J, Novotny MV, Ohno E, Packer NH, Palaima E, Renfrow MB, Tajiri M, Thomsson KA, Yagi H, Yu SY, Taniguchi N. (2010). Comparison of methods for profiling O-glycosylation: Human Proteome Organisation Human Disease Glycomics/Proteome Initiative multi-institutional study of IgA1. Mol Cell Proteomics. Apr;9(4):719-27. doi: 10.1074/mcp.M900450-MCP200. Epub 2009 Dec 28.PMID:20038609 PMCID:PMC2860227

2009

Snyder DS, Brahamsha B, Azadi P, Palenik B. (2009)  Structure of compositionally simple lipopolysaccharide from marine synechococcus. J Bacteriol. Sep;191(17):5499-509. doi:10.1128/JB.00121-09. Epub 2009 Jul 6. PMID:19581366 PMCID:PMC2725629

Naran R, Black S, Decker SR, Azadi P. (2009) Extraction and characterization of native heteroxylans from delignified corn stover and aspen.  Cellulose. 16:661-675. doi:10.1007/s10570-009-9324-y

Zhang J, Heiss C, Thorne PG, Bal Chandralata, Azadi P, Lynd LR. (2009).  Formation of ethyl b-xylopyranoside during simultaneous saccharification and co-fermentation of paper sludge. Enzyme and Microbial Technology. Vol. 44, (4) April, pp 196-202.

Heiss C, Klutts JS, Wang Z, Doering TL, Azadi P. (2009) The structure of Cryptococcus neoformans galactoxylomannan contains beta-D-glucuronic acid. Carbohydr Res.  May 12;344(7):915-20.doi:10.1016/j.carres.2009.03.003. Epub 2009 Mar 10. PMID:19345342 PMCID:PMC2695399

Azadi P, Heiss C. (Mass spectrometry of N-linked glycans.  (2009) Methods Mol Biol. 534:37-51. doi: 10.1007/978-1-59745-022-5_3. Review. PMID:19277537

Lee ST, Mitchell RB, Wang Z, Heiss C, Gardner DR, Azadi P. (2009) Isolation, characterization, and quantification of steroidal saponins in switchgrass (Panicum virgatum L.). J Agric Food Chem.  Mar 25;57(6):2599-604. doi: 10.1021/jf803907y. PMID:19243100

Li Y, Cao C, Jia W, Yu L, Mo M, Wang Q, Huang Y, Lim JM, Ishihara M, Wells L, Azadi P, Robinson H, He YW, Zhang L, Mariuzza RA. (2009) Structure of the F-spondin domain of mindin, an integrin ligand and pattern recognition molecule. EMBO J. 2009 Feb 4;28(3):286-97. doi: 10.1038/emboj.2008.288. Epub 2009 Jan 15. PMID:19153605 PMCID:PMC2637340

Chill L, Trinh L, Azadi P, Ishihara M, Sonon R, Karnaukhova E, Ophir Y, Golding B, Shiloach J. (2009) Production, purification, and characterization of human alpha1 proteinase inhibitor from Aspergillus niger. Biotechnol Bioeng. 2009 Feb 15;102(3):828-44. doi: 10.1002/bit.22099. PMID:18828177

2008

Macnaughtan MA, Tian F, Liu S, Meng L, Park S, Azadi P, Moremen KW, Prestegard JH. (2008), 13C-sialic acid labeling of glycans on glycoproteins using ST6Gal-I. J Am Chem Soc.  Sep 10;130(36):11864-5. doi: 10.1021/ja804614w. Epub 2008 Aug 14. PMID:18700760 PMCID:PMC2640832

2007

Li J, Ryder C, Mandal M, Ahmed F, Azadi P, Snyder DS, Pechous RD, Zahrt T, Inzana TJ. (2007), Attenuation and protective efficacy of an O-antigen-deficient mutant of Francisella tularensis LVS. Microbiology. Sep;153(Pt 9):3141-53. PMID:17768257

Garner ST Jr, Israel BJ, Achmed H, Capomacchia AC, Abney T, Azadi P. (2007), Transdermal permeability of N-acetyl-D-glucosamine. Pharm Dev Technol. 2007;12(2):169-74. PMID:17510888

Alvarez-Manilla G, Warren NL, Abney T, Atwood J 3rd, Azadi P, York WS, Pierce M, Orlando R. (2007), Tools for glycomics: relative quantitation of glycans by isotopic permethylation using 13CH3I. Glycobiology.  Jul;17(7):677-87. Epub 2007 Mar 23. PMID:17384119

Wada Y, Azadi P, Costello CE, Dell A, Dwek RA, Geyer H, Geyer R, Kakehi K, Karlsson NG, Kato K, Kawasaki N, Khoo KH, Kim S, Kondo A, Lattova E, Mechref Y, Miyoshi E, Nakamura K, Narimatsu H, Novotny MV, Packer NH, Perreault H, Peter-Katalinic J, Pohlentz G, Reinhold VN, Rudd PM, Suzuki A, Taniguchi N. (2007) Comparison of the methods for profiling glycoprotein glycans–HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study. Glycobiology. Apr;17(4):411-22. Epub 2007 Jan 12. Erratum in: Glycobiology. 2007 May;17(5):10G. PMID:17223647

Brett PJ, Burtnick MN, Snyder DS, Shannon JG, Azadi P, Gherardini FC. (2007) Burkholderia mallei expresses a unique lipopolysaccharide mixture that is a potent activator of human Toll-like receptor 4 complexes. Mol Microbiol. Jan;63(2):379-90. Epub 2006 Dec 5. PMID:17163980 PMCID:PMC1974782

2006

Schietinger A, Philip M, Yoshida BA, Azadi P, Liu H. Meredit SC, Schreiber H. (2006) A mutant chaperone converts a wild-type protein into a tumor-specific antigen. Science. Oct 13:314(5797: 304-8. PMID: 17038624

Zhang P, Snyder S, Feng P, Azadi P, Zhang S, Bulgheresi S, Sanderson KE, He J, Klena J, Chen T. (2006) Role of N-acetylglucosamine within core lipopolysaccharide of several species of gram-negative bacteria in targeting the DC-SIGN (CD209). J Immunol. Sep 15;177(6):4002-11. PMID:16951363

Gibson DL, White AP, Snyder SD, Martin S, Heiss C, Azadi P, Surette M, Kay WW. (2006) Salmonella produces an O-antigen capsule regulated by AgfD and important for environmental persistence. J Bacteriol.  Nov;188(22):7722-30. PMID:17079680, PMCID: PMC1636306 PMCID:PMC1636306

Snyder DS, Gibson D, Heiss C, Kay W, Azadi P. (2006) Structure of a capsular polysaccharide isolated from Salmonella enteritidis. Carbohydr Res.  Oct 16;341(14):2388-97. Epub 2006 Jul 20. PMID:16857179

2004

Laus MC, Logman TJ, Van Brussel AA, Carlson RW, Azadi P, Gao MY, Kijne JW. (2004), Involvement of exo5 in production of surface polysaccharides in Rhizobium leguminosarum and its role in nodulation of Vicia sativa subsp. nigra. J Bacteriol.  Oct;186(19):6617-25. PMID:15375143 PMCID:PMC516619

Kamar M, Alvarez-Manilla G, Abney T, Azadi P, Kumar Kolli VS, Orlando R, Pierce M. (2004), Analysis of the site-specific N-glycosylation of beta1,6 N-acetylglucosaminyltransferase V. Glycobiology. 2004 Jul;14(7):583-92. Epub 2004 Apr 14. PMID:15084511

Jahfar M. Azadi P. (2004) Glycosyl compostion of polysaccharide from Tinospora cordifolia, II, Glycosyl linkages. Pharm. Mar:54(1):73-8. PMID:15050047

2003

Wozniak DJ, Wyckoff TJ, Starkey M, Keyser R, Azadi P, O’Toole GA, Parsek MR. (2003) , Alginate is not a significant component of the extracellular polysaccharide matrix of PA14 and PAO1 Pseudomonas aeruginosa biofilms. Proc Natl Acad Sci U S A. 2003 Jun 24;100(13):7907-12. Epub 2003 Jun 16. PMID:12810959 PMCID:PMC164686

Lawrence ML, Banes MM, Azadi P, Reeks BY. (2003) The Edwardsiella ictaluri O polysaccharide biosynthesis gene cluster and the role of O polysaccharide in resistance to normal catfish serum and catfish neutrophils. Microbiology.  Jun;149(Pt 6):1409-21. PMID:12777482

2002

Marsh ME, Ridall AL, Azadi P, Duke PJ. (2002) Galacturonomannan and Golfi-derived membrane linked to growth and shaping of biogenic calcite. J Struct Biol. Jul:139(1):39-45. PMID:12372318

2001

Sangadala S, Azadi P, Carlson R, Adang MJ. (2001) Carbohydrate analyses of Manduca sexta aminopeptidase N. co-purifying neutral lipids and their functional interactions with Bacillus thuringiensis Cry1Ac toxin. Insect Biochem Mol Biol. Dec:32(1):97-107. PMID:11719073

2000

Liab K, Azadi P, Collins R, Tolan J, Kim jS, Eriksson KL. (2000) Relationships between activities of xylanses and xylan structures. Enzyme Microb Technol. Jul1;27(1-2):89-94. PMID: 10862906

1998

Ohana P, Delmer DP, Carlson RW, Glushka J, Azadi P, Benziman M. (1998) Identification of a novel triterpenoid saponin from Pisum sativum as a specific inhibitor of the diguanylate cyclase of Acetobacter xylinum. Plant Cell Physiol. 39(2): 144-152.

1996

Khoo KH, Douglas E, Azadi P, Inamine JM, Besra GS, Milusova K, Brennan PJ, Chatterjee D. (1996) Truncated Structural Variants of Lipoarabinomannan in Ethambutol Drug-resistant Strains of Mycobacterium smegmatis: Inhibition of Arabinan Biosynthesis by Ethambutol. J. Biol. Chem. 271:28682-28690.

1995

Azadi P, O’Neill MA, Bergmann C, Darvill AG, Albersheim P. (1995) The backbone of the pectic polysaccharide rhamnogalacturonan I is cleaved by an andohydrolase and an endolyase. Glycobiology.  Dec;5(8):783-9. PMID:8720076.

1993

Siciliano RA, Morris HR, McDowell RA, Azadi P, Rogers ME, Bennett HPJ, Dell A. (1993) The Lewis x ipitope is a major non-reducing structure in the sulphated N-glycans attached to Asn-65 of bovine pro-opiomelanocortin. Glycobiology.  3(3):225-239. doi:10.1093/glycob/3.3225

Sambasivam H, Rassouli M, Murray RK, Nagpurkar A, Mookerjea S, Azadi P, Dell A, Morros HR. (1993) Studies on the Carbohydrate Moiety and on the Biosynthesis of Rat C-reactive Protein. The Journal of Biological Chemistry. Vol. 268, No. 14, Issue of May 15, pp 1007-10016.

1992

Rassouli M. Sambasivam H. Azadi P, Dell A, Morris HR, Nagpurkar A. Mookerjea S. Murray RK.  (1992) Derivation of the amino acid sequence of rat C-reactive protein from cDNA cloning with additional studies on the nature of its dimeric component.  J. Biol Chem. Feb 15;267(5):2947-54. PMID:1737750

Linget C, Collinson SK, Azadi P, Dell A, Page WJ, Abdallah MA.  (1992) Structure of Azoverdin, a Pyoverdin-like Siderophore of Azomonas macrocytogenes ATCC 12334.  Tetrahedron Letters. Vol 33, No. 14, pp 1889-1892. Printed in Great Britain.

1990

Dell A, Azadi P, Tiller P, Thomas-Oates J, Jennings HJ, Beurret M, Francis M. (1990) Analysis of oligosaccharide epitopes of meningococcal lipopolysaccharides by fast-atom-bombardment mass spectrometry. Carbohydrate Research. 200 59-76.

Manzi AE, Dell A, Azadi P, Varki A (1990) Studies of naturally occurring modification of sialic acids by fast atom bombardment mass spectrometry: Analysis of positional isomers by periodate cleavage.  J. Biol. Chem. 265: 8094-8107.  PMID: 2159468